Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LCA10Q71F78 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LCA10Q71F78 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
LCA10Q71F78 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
LCA10Q71F78 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC9.6□□□□□ -0.87
LCA10Q71F78 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LCA10Q71F78 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC9.6□□□□□ -0.87
LCA10Q71F78 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC9.6□□□□□ -0.87
LCA10Q71F78 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC9.6□□□□□ -0.87
LCA10Q71F78 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC9.6□□□□□ -0.87
LCA10Q71F78 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
LCA10Q71F78 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC9.6□□□□□ -0.87
LCA10Q71F78 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LCA10Q71F78 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC9.6□□□□□ -0.87
LCA10Q71F78 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC9.6□□□□□ -0.87
LCA10Q71F78 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC9.6□□□□□ -0.87
LCA10Q71F78 ANKRD18DP-204ENST00000455355 1975 ntBASIC9.6□□□□□ -0.87
LCA10Q71F78 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC9.6□□□□□ -0.87
LCA10Q71F78 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
LCA10Q71F78 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC9.6□□□□□ -0.87
LCA10Q71F78 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
LCA10Q71F78 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
LCA10Q71F78 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
LCA10Q71F78 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LCA10Q71F78 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC9.6□□□□□ -0.87
LCA10Q71F78 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LCA10Q71F78 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
LCA10Q71F78 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC9.6□□□□□ -0.87
LCA10Q71F78 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
LCA10Q71F78 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC9.6□□□□□ -0.87
LCA10Q71F78 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LCA10Q71F78 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
LCA10Q71F78 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LCA10Q71F78 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC9.6□□□□□ -0.87
LCA10Q71F78 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
LCA10Q71F78 AL603756.1-201ENST00000606511 2163 ntBASIC9.6□□□□□ -0.87
LCA10Q71F78 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
LCA10Q71F78 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LCA10Q71F78 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
LCA10Q71F78 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC9.6□□□□□ -0.87
LCA10Q71F78 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LCA10Q71F78 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
LCA10Q71F78 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
LCA10Q71F78 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
LCA10Q71F78 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
LCA10Q71F78 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
LCA10Q71F78 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
LCA10Q71F78 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC9.59□□□□□ -0.87
LCA10Q71F78 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC9.59□□□□□ -0.87
LCA10Q71F78 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC9.59□□□□□ -0.87
LCA10Q71F78 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC9.59□□□□□ -0.87
LCA10Q71F78 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC9.59□□□□□ -0.87
LCA10Q71F78 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC9.59□□□□□ -0.87
LCA10Q71F78 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC9.59□□□□□ -0.87
LCA10Q71F78 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC9.59□□□□□ -0.87
LCA10Q71F78 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC9.59□□□□□ -0.87
LCA10Q71F78 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
LCA10Q71F78 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC9.59□□□□□ -0.87
LCA10Q71F78 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC9.59□□□□□ -0.87
LCA10Q71F78 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 LSM12P1-201ENST00000411836 588 ntBASIC9.59□□□□□ -0.87
LCA10Q71F78 AC006015.1-201ENST00000429970 570 ntBASIC9.59□□□□□ -0.87
LCA10Q71F78 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 AC093787.1-201ENST00000450396 207 ntBASIC9.59□□□□□ -0.87
LCA10Q71F78 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC9.59□□□□□ -0.87
LCA10Q71F78 ISCU-212ENST00000547005 795 ntTSL 3 BASIC9.59□□□□□ -0.87
LCA10Q71F78 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 PARP1-210ENST00000629232 477 ntTSL 5 BASIC9.59□□□□□ -0.87
LCA10Q71F78 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC9.59□□□□□ -0.87
LCA10Q71F78 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms