Protein–RNA interactions for Protein: Q6ZMY6

WDR88, WD repeat-containing protein 88, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WDR88Q6ZMY6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
WDR88Q6ZMY6 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
WDR88Q6ZMY6 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
WDR88Q6ZMY6 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
WDR88Q6ZMY6 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.18■□□□□ 0.18
WDR88Q6ZMY6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
WDR88Q6ZMY6 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
WDR88Q6ZMY6 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
WDR88Q6ZMY6 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
WDR88Q6ZMY6 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.17■□□□□ 0.18
WDR88Q6ZMY6 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
WDR88Q6ZMY6 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
WDR88Q6ZMY6 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
WDR88Q6ZMY6 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
WDR88Q6ZMY6 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
WDR88Q6ZMY6 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
WDR88Q6ZMY6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
WDR88Q6ZMY6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
WDR88Q6ZMY6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
WDR88Q6ZMY6 RCN1P1-201ENST00000400413 996 ntBASIC16.17■□□□□ 0.18
WDR88Q6ZMY6 AC104076.2-201ENST00000448912 469 ntBASIC16.17■□□□□ 0.18
WDR88Q6ZMY6 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.17■□□□□ 0.18
WDR88Q6ZMY6 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.17■□□□□ 0.18
WDR88Q6ZMY6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.17■□□□□ 0.18
WDR88Q6ZMY6 ZNF444P1-201ENST00000559497 298 ntBASIC16.17■□□□□ 0.18
WDR88Q6ZMY6 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.17■□□□□ 0.18
WDR88Q6ZMY6 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
WDR88Q6ZMY6 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
WDR88Q6ZMY6 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
WDR88Q6ZMY6 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
WDR88Q6ZMY6 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
WDR88Q6ZMY6 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
WDR88Q6ZMY6 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
WDR88Q6ZMY6 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
WDR88Q6ZMY6 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
WDR88Q6ZMY6 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.17■□□□□ 0.18
WDR88Q6ZMY6 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
WDR88Q6ZMY6 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
WDR88Q6ZMY6 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 AK4P3-201ENST00000418260 669 ntBASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 HOMER2P1-201ENST00000455653 964 ntBASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 RNF126P1-202ENST00000569893 925 ntBASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 GPR32P1-201ENST00000601788 811 ntBASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 PRORSD1P-202ENST00000563365 2154 ntBASIC16.16■□□□□ 0.18
WDR88Q6ZMY6 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
WDR88Q6ZMY6 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.15■□□□□ 0.18
WDR88Q6ZMY6 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
WDR88Q6ZMY6 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
WDR88Q6ZMY6 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
WDR88Q6ZMY6 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
WDR88Q6ZMY6 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
WDR88Q6ZMY6 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
WDR88Q6ZMY6 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
WDR88Q6ZMY6 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
WDR88Q6ZMY6 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
WDR88Q6ZMY6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
WDR88Q6ZMY6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.15■□□□□ 0.18
WDR88Q6ZMY6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
WDR88Q6ZMY6 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
WDR88Q6ZMY6 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
WDR88Q6ZMY6 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.15■□□□□ 0.18
WDR88Q6ZMY6 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.15■□□□□ 0.18
WDR88Q6ZMY6 AC068472.1-201ENST00000474589 881 ntBASIC16.15■□□□□ 0.18
WDR88Q6ZMY6 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
WDR88Q6ZMY6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.15■□□□□ 0.18
WDR88Q6ZMY6 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.15■□□□□ 0.18
WDR88Q6ZMY6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.15■□□□□ 0.18
WDR88Q6ZMY6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms