Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 GOLGA6L5P-202ENST00000515341 1828 ntBASIC15.5■□□□□ 0.07
C11orf88Q6PI97 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.5■□□□□ 0.07
C11orf88Q6PI97 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 RBM17P1-201ENST00000453646 1190 ntBASIC15.5■□□□□ 0.07
C11orf88Q6PI97 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 AC145285.6-201ENST00000604632 637 ntBASIC15.5■□□□□ 0.07
C11orf88Q6PI97 DGCR10-201ENST00000609839 495 ntBASIC15.5■□□□□ 0.07
C11orf88Q6PI97 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
C11orf88Q6PI97 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
C11orf88Q6PI97 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
C11orf88Q6PI97 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
C11orf88Q6PI97 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
C11orf88Q6PI97 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
C11orf88Q6PI97 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.49■□□□□ 0.07
C11orf88Q6PI97 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
C11orf88Q6PI97 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
C11orf88Q6PI97 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
C11orf88Q6PI97 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
C11orf88Q6PI97 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
C11orf88Q6PI97 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.49■□□□□ 0.07
C11orf88Q6PI97 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
C11orf88Q6PI97 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC15.49■□□□□ 0.07
C11orf88Q6PI97 FSCN1P1-201ENST00000568912 1481 ntBASIC15.49■□□□□ 0.07
C11orf88Q6PI97 KRT18P21-201ENST00000515767 1272 ntBASIC15.49■□□□□ 0.07
C11orf88Q6PI97 REXO1L10P-201ENST00000615707 1290 ntBASIC15.49■□□□□ 0.07
C11orf88Q6PI97 AL445675.2-201ENST00000620291 557 ntBASIC15.49■□□□□ 0.07
C11orf88Q6PI97 CR392000.1-201ENST00000624770 1228 ntBASIC15.49■□□□□ 0.07
C11orf88Q6PI97 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
C11orf88Q6PI97 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
C11orf88Q6PI97 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
C11orf88Q6PI97 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
C11orf88Q6PI97 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
C11orf88Q6PI97 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
C11orf88Q6PI97 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
C11orf88Q6PI97 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
C11orf88Q6PI97 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
C11orf88Q6PI97 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
C11orf88Q6PI97 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
C11orf88Q6PI97 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
C11orf88Q6PI97 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
C11orf88Q6PI97 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
C11orf88Q6PI97 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
C11orf88Q6PI97 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.49■□□□□ 0.07
C11orf88Q6PI97 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
C11orf88Q6PI97 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
C11orf88Q6PI97 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
C11orf88Q6PI97 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.48■□□□□ 0.07
C11orf88Q6PI97 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.48■□□□□ 0.07
C11orf88Q6PI97 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms