Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CASC4Q6P4E1 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CASC4Q6P4E1 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CASC4Q6P4E1 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CASC4Q6P4E1 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CASC4Q6P4E1 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CASC4Q6P4E1 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.11■□□□□ 0.49
CASC4Q6P4E1 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CASC4Q6P4E1 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CASC4Q6P4E1 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CASC4Q6P4E1 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CASC4Q6P4E1 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CASC4Q6P4E1 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.11■□□□□ 0.49
CASC4Q6P4E1 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.11■□□□□ 0.49
CASC4Q6P4E1 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.11■□□□□ 0.49
CASC4Q6P4E1 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.11■□□□□ 0.49
CASC4Q6P4E1 COX11P1-201ENST00000489116 835 ntBASIC18.11■□□□□ 0.49
CASC4Q6P4E1 AC113404.2-201ENST00000507884 177 ntBASIC18.11■□□□□ 0.49
CASC4Q6P4E1 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
CASC4Q6P4E1 AC010203.1-204ENST00000548782 407 ntBASIC18.11■□□□□ 0.49
CASC4Q6P4E1 AL031432.5-201ENST00000641059 760 ntBASIC18.11■□□□□ 0.49
CASC4Q6P4E1 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CASC4Q6P4E1 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CASC4Q6P4E1 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CASC4Q6P4E1 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.11■□□□□ 0.49
CASC4Q6P4E1 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.11■□□□□ 0.49
CASC4Q6P4E1 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CASC4Q6P4E1 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CASC4Q6P4E1 AC108860.2-201ENST00000562760 2183 ntBASIC18.11■□□□□ 0.49
CASC4Q6P4E1 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CASC4Q6P4E1 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CASC4Q6P4E1 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CASC4Q6P4E1 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.1■□□□□ 0.49
CASC4Q6P4E1 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
CASC4Q6P4E1 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.1■□□□□ 0.49
CASC4Q6P4E1 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CASC4Q6P4E1 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.1■□□□□ 0.49
CASC4Q6P4E1 AC009949.1-201ENST00000623048 1830 ntBASIC18.1■□□□□ 0.49
CASC4Q6P4E1 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.1■□□□□ 0.49
CASC4Q6P4E1 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.1■□□□□ 0.49
CASC4Q6P4E1 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.1■□□□□ 0.49
CASC4Q6P4E1 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.1■□□□□ 0.49
CASC4Q6P4E1 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.1■□□□□ 0.49
CASC4Q6P4E1 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CASC4Q6P4E1 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CASC4Q6P4E1 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.1■□□□□ 0.49
CASC4Q6P4E1 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.1■□□□□ 0.49
CASC4Q6P4E1 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.1■□□□□ 0.49
CASC4Q6P4E1 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CASC4Q6P4E1 AL136038.4-201ENST00000603606 1261 ntBASIC18.1■□□□□ 0.49
CASC4Q6P4E1 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.1■□□□□ 0.49
CASC4Q6P4E1 AC133561.5-201ENST00000635547 218 ntBASIC18.1■□□□□ 0.49
CASC4Q6P4E1 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CASC4Q6P4E1 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
CASC4Q6P4E1 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CASC4Q6P4E1 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CASC4Q6P4E1 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.1■□□□□ 0.49
CASC4Q6P4E1 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CASC4Q6P4E1 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CASC4Q6P4E1 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.1■□□□□ 0.49
CASC4Q6P4E1 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CASC4Q6P4E1 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CASC4Q6P4E1 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CASC4Q6P4E1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CASC4Q6P4E1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CASC4Q6P4E1 AC133963.1-201ENST00000504166 1679 ntBASIC18.09■□□□□ 0.49
CASC4Q6P4E1 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CASC4Q6P4E1 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.09■□□□□ 0.49
CASC4Q6P4E1 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CASC4Q6P4E1 AL391807.1-203ENST00000604392 2365 ntBASIC18.09■□□□□ 0.49
CASC4Q6P4E1 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CASC4Q6P4E1 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CASC4Q6P4E1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CASC4Q6P4E1 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CASC4Q6P4E1 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CASC4Q6P4E1 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.09■□□□□ 0.49
CASC4Q6P4E1 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.09■□□□□ 0.49
CASC4Q6P4E1 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CASC4Q6P4E1 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.09■□□□□ 0.49
CASC4Q6P4E1 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.09■□□□□ 0.49
CASC4Q6P4E1 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.09■□□□□ 0.49
CASC4Q6P4E1 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CASC4Q6P4E1 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.09■□□□□ 0.49
CASC4Q6P4E1 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.09■□□□□ 0.49
CASC4Q6P4E1 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CASC4Q6P4E1 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CASC4Q6P4E1 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CASC4Q6P4E1 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CASC4Q6P4E1 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CASC4Q6P4E1 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.09■□□□□ 0.49
CASC4Q6P4E1 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.09■□□□□ 0.49
CASC4Q6P4E1 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.09■□□□□ 0.49
CASC4Q6P4E1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.09■□□□□ 0.49
CASC4Q6P4E1 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.09■□□□□ 0.49
CASC4Q6P4E1 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CASC4Q6P4E1 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
CASC4Q6P4E1 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CASC4Q6P4E1 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CASC4Q6P4E1 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CASC4Q6P4E1 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms