Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD4Q5XG99 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD4Q5XG99 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
LYSMD4Q5XG99 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.31■□□□□ 0.36
LYSMD4Q5XG99 RHOQP3-201ENST00000437982 621 ntBASIC17.31■□□□□ 0.36
LYSMD4Q5XG99 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD4Q5XG99 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.31■□□□□ 0.36
LYSMD4Q5XG99 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.31■□□□□ 0.36
LYSMD4Q5XG99 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.31■□□□□ 0.36
LYSMD4Q5XG99 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.31■□□□□ 0.36
LYSMD4Q5XG99 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LYSMD4Q5XG99 AC023141.13-201ENST00000604991 943 ntBASIC17.31■□□□□ 0.36
LYSMD4Q5XG99 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
LYSMD4Q5XG99 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
LYSMD4Q5XG99 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD4Q5XG99 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
LYSMD4Q5XG99 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD4Q5XG99 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD4Q5XG99 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.31■□□□□ 0.36
LYSMD4Q5XG99 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD4Q5XG99 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.31■□□□□ 0.36
LYSMD4Q5XG99 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD4Q5XG99 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.3■□□□□ 0.36
LYSMD4Q5XG99 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.3■□□□□ 0.36
LYSMD4Q5XG99 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD4Q5XG99 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LYSMD4Q5XG99 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD4Q5XG99 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.3■□□□□ 0.36
LYSMD4Q5XG99 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
LYSMD4Q5XG99 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD4Q5XG99 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD4Q5XG99 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
LYSMD4Q5XG99 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.3■□□□□ 0.36
LYSMD4Q5XG99 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD4Q5XG99 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.3■□□□□ 0.36
LYSMD4Q5XG99 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD4Q5XG99 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.3■□□□□ 0.36
LYSMD4Q5XG99 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD4Q5XG99 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.3■□□□□ 0.36
LYSMD4Q5XG99 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.3■□□□□ 0.36
LYSMD4Q5XG99 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD4Q5XG99 AC004835.2-201ENST00000603762 682 ntBASIC17.3■□□□□ 0.36
LYSMD4Q5XG99 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.3■□□□□ 0.36
LYSMD4Q5XG99 AL353135.1-201ENST00000606729 504 ntBASIC17.3■□□□□ 0.36
LYSMD4Q5XG99 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.3■□□□□ 0.36
LYSMD4Q5XG99 AC091812.2-201ENST00000619081 385 ntBASIC17.3■□□□□ 0.36
LYSMD4Q5XG99 BX276092.7-203ENST00000637198 1536 ntBASIC17.3■□□□□ 0.36
LYSMD4Q5XG99 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD4Q5XG99 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
LYSMD4Q5XG99 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD4Q5XG99 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD4Q5XG99 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.29■□□□□ 0.36
LYSMD4Q5XG99 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
LYSMD4Q5XG99 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.29■□□□□ 0.36
LYSMD4Q5XG99 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD4Q5XG99 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD4Q5XG99 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD4Q5XG99 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.29■□□□□ 0.36
LYSMD4Q5XG99 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD4Q5XG99 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD4Q5XG99 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.29■□□□□ 0.36
LYSMD4Q5XG99 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LYSMD4Q5XG99 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LYSMD4Q5XG99 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.29■□□□□ 0.36
LYSMD4Q5XG99 AC004449.1-201ENST00000564240 433 ntBASIC17.29■□□□□ 0.36
LYSMD4Q5XG99 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD4Q5XG99 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD4Q5XG99 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
LYSMD4Q5XG99 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LYSMD4Q5XG99 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD4Q5XG99 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD4Q5XG99 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LYSMD4Q5XG99 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD4Q5XG99 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD4Q5XG99 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD4Q5XG99 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.28■□□□□ 0.36
LYSMD4Q5XG99 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD4Q5XG99 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD4Q5XG99 AC009336.1-201ENST00000608941 1553 ntBASIC17.28■□□□□ 0.36
LYSMD4Q5XG99 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD4Q5XG99 AL031598.1-201ENST00000561511 1773 ntBASIC17.28■□□□□ 0.36
LYSMD4Q5XG99 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD4Q5XG99 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD4Q5XG99 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
LYSMD4Q5XG99 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.28■□□□□ 0.36
LYSMD4Q5XG99 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.28■□□□□ 0.36
LYSMD4Q5XG99 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD4Q5XG99 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD4Q5XG99 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD4Q5XG99 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD4Q5XG99 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD4Q5XG99 LINC00982-205ENST00000420957 435 ntBASIC17.28■□□□□ 0.36
LYSMD4Q5XG99 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.28■□□□□ 0.36
LYSMD4Q5XG99 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.28■□□□□ 0.36
LYSMD4Q5XG99 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD4Q5XG99 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.28■□□□□ 0.36
LYSMD4Q5XG99 OR7E47P-204ENST00000575924 449 ntBASIC17.28■□□□□ 0.36
LYSMD4Q5XG99 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.28■□□□□ 0.36
LYSMD4Q5XG99 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.28■□□□□ 0.36
LYSMD4Q5XG99 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms