Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 FLJ13224-201ENST00000313737 1514 ntBASIC17.13■□□□□ 0.33
RNF220Q5VTB9 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 MIR718-201ENST00000390190 70 ntBASIC17.13■□□□□ 0.33
RNF220Q5VTB9 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF220Q5VTB9 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF220Q5VTB9 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.12■□□□□ 0.33
RNF220Q5VTB9 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.12■□□□□ 0.33
RNF220Q5VTB9 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.12■□□□□ 0.33
RNF220Q5VTB9 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
RNF220Q5VTB9 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.12■□□□□ 0.33
RNF220Q5VTB9 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF220Q5VTB9 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.12■□□□□ 0.33
RNF220Q5VTB9 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF220Q5VTB9 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.12■□□□□ 0.33
RNF220Q5VTB9 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF220Q5VTB9 MIR564-202ENST00000385049 94 ntBASIC17.12■□□□□ 0.33
RNF220Q5VTB9 AP000593.1-201ENST00000393668 712 ntBASIC17.12■□□□□ 0.33
RNF220Q5VTB9 CRYGFP-201ENST00000418459 633 ntBASIC17.12■□□□□ 0.33
RNF220Q5VTB9 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.12■□□□□ 0.33
RNF220Q5VTB9 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF220Q5VTB9 AC008550.1-201ENST00000511500 884 ntBASIC17.12■□□□□ 0.33
RNF220Q5VTB9 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF220Q5VTB9 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF220Q5VTB9 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.12■□□□□ 0.33
RNF220Q5VTB9 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
RNF220Q5VTB9 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF220Q5VTB9 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF220Q5VTB9 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF220Q5VTB9 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF220Q5VTB9 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF220Q5VTB9 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF220Q5VTB9 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF220Q5VTB9 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF220Q5VTB9 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RNF220Q5VTB9 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF220Q5VTB9 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RNF220Q5VTB9 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RNF220Q5VTB9 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF220Q5VTB9 MYLKP1-201ENST00000509077 1580 ntBASIC17.11■□□□□ 0.33
RNF220Q5VTB9 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF220Q5VTB9 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF220Q5VTB9 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF220Q5VTB9 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF220Q5VTB9 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RNF220Q5VTB9 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF220Q5VTB9 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF220Q5VTB9 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF220Q5VTB9 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RNF220Q5VTB9 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF220Q5VTB9 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF220Q5VTB9 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF220Q5VTB9 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF220Q5VTB9 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF220Q5VTB9 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF220Q5VTB9 AP003071.4-201ENST00000562276 1284 ntBASIC17.11■□□□□ 0.33
RNF220Q5VTB9 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF220Q5VTB9 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF220Q5VTB9 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF220Q5VTB9 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF220Q5VTB9 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF220Q5VTB9 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF220Q5VTB9 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
RNF220Q5VTB9 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RNF220Q5VTB9 AC006116.8-202ENST00000587620 1550 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms