Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RC3H1Q5TC82 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
RC3H1Q5TC82 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC22.15■■□□□ 1.14
RC3H1Q5TC82 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC22.15■■□□□ 1.14
RC3H1Q5TC82 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RC3H1Q5TC82 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RC3H1Q5TC82 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC22.15■■□□□ 1.14
RC3H1Q5TC82 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC22.15■■□□□ 1.14
RC3H1Q5TC82 IGHV3OR16-6-201ENST00000568775 360 ntBASIC22.15■■□□□ 1.14
RC3H1Q5TC82 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC22.15■■□□□ 1.14
RC3H1Q5TC82 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RC3H1Q5TC82 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
RC3H1Q5TC82 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC22.15■■□□□ 1.14
RC3H1Q5TC82 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC22.15■■□□□ 1.14
RC3H1Q5TC82 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RC3H1Q5TC82 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
RC3H1Q5TC82 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
RC3H1Q5TC82 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RC3H1Q5TC82 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.14■■□□□ 1.14
RC3H1Q5TC82 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
RC3H1Q5TC82 AC092919.2-201ENST00000623631 1645 ntBASIC22.14■■□□□ 1.14
RC3H1Q5TC82 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RC3H1Q5TC82 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RC3H1Q5TC82 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RC3H1Q5TC82 HLA-DRB6-201ENST00000411500 1235 ntBASIC22.14■■□□□ 1.13
RC3H1Q5TC82 AC112191.1-201ENST00000523689 701 ntBASIC22.14■■□□□ 1.13
RC3H1Q5TC82 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RC3H1Q5TC82 AC093520.2-201ENST00000561830 333 ntBASIC22.14■■□□□ 1.13
RC3H1Q5TC82 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RC3H1Q5TC82 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
RC3H1Q5TC82 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RC3H1Q5TC82 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RC3H1Q5TC82 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.14■■□□□ 1.13
RC3H1Q5TC82 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RC3H1Q5TC82 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
RC3H1Q5TC82 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC22.14■■□□□ 1.13
RC3H1Q5TC82 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC22.14■■□□□ 1.13
RC3H1Q5TC82 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
RC3H1Q5TC82 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC22.14■■□□□ 1.13
RC3H1Q5TC82 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RC3H1Q5TC82 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RC3H1Q5TC82 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RC3H1Q5TC82 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RC3H1Q5TC82 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
RC3H1Q5TC82 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
RC3H1Q5TC82 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RC3H1Q5TC82 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC22.13■■□□□ 1.13
RC3H1Q5TC82 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RC3H1Q5TC82 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
RC3H1Q5TC82 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RC3H1Q5TC82 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RC3H1Q5TC82 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC22.13■■□□□ 1.13
RC3H1Q5TC82 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC22.13■■□□□ 1.13
RC3H1Q5TC82 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC22.13■■□□□ 1.13
RC3H1Q5TC82 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
RC3H1Q5TC82 DUT-210ENST00000559935 569 ntTSL 3 BASIC22.13■■□□□ 1.13
RC3H1Q5TC82 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
RC3H1Q5TC82 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC22.13■■□□□ 1.13
RC3H1Q5TC82 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC22.13■■□□□ 1.13
RC3H1Q5TC82 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC22.13■■□□□ 1.13
RC3H1Q5TC82 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RC3H1Q5TC82 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RC3H1Q5TC82 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RC3H1Q5TC82 AC093677.2-201ENST00000600169 1863 ntBASIC22.13■■□□□ 1.13
RC3H1Q5TC82 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RC3H1Q5TC82 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC22.13■■□□□ 1.13
RC3H1Q5TC82 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RC3H1Q5TC82 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RC3H1Q5TC82 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RC3H1Q5TC82 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
RC3H1Q5TC82 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RC3H1Q5TC82 CROCCP3-202ENST00000420820 1947 ntBASIC22.12■■□□□ 1.13
RC3H1Q5TC82 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC22.12■■□□□ 1.13
RC3H1Q5TC82 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RC3H1Q5TC82 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC22.12■■□□□ 1.13
RC3H1Q5TC82 FALEC-201ENST00000416894 566 ntTSL 3 BASIC22.12■■□□□ 1.13
RC3H1Q5TC82 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC22.12■■□□□ 1.13
RC3H1Q5TC82 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RC3H1Q5TC82 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC22.12■■□□□ 1.13
RC3H1Q5TC82 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC22.12■■□□□ 1.13
RC3H1Q5TC82 PRR29-209ENST00000582540 967 ntTSL 2 BASIC22.12■■□□□ 1.13
RC3H1Q5TC82 AC138761.1-201ENST00000584393 385 ntBASIC22.12■■□□□ 1.13
RC3H1Q5TC82 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC22.12■■□□□ 1.13
RC3H1Q5TC82 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RC3H1Q5TC82 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC22.12■■□□□ 1.13
RC3H1Q5TC82 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RC3H1Q5TC82 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RC3H1Q5TC82 AC073130.3-201ENST00000624389 2278 ntBASIC22.11■■□□□ 1.13
RC3H1Q5TC82 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC22.11■■□□□ 1.13
RC3H1Q5TC82 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RC3H1Q5TC82 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RC3H1Q5TC82 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC22.11■■□□□ 1.13
RC3H1Q5TC82 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
RC3H1Q5TC82 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RC3H1Q5TC82 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC22.11■■□□□ 1.13
RC3H1Q5TC82 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
RC3H1Q5TC82 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
RC3H1Q5TC82 AL513480.1-201ENST00000451731 511 ntBASIC22.11■■□□□ 1.13
RC3H1Q5TC82 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC22.11■■□□□ 1.13
RC3H1Q5TC82 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms