Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 RNF152P1-201ENST00000397754 604 ntBASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 AC117947.1-201ENST00000427448 529 ntBASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 KRT18P57-201ENST00000443599 1254 ntBASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 YBX1P2-201ENST00000489612 999 ntBASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 AC139887.4-201ENST00000607877 719 ntBASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 AC024243.1-201ENST00000609234 778 ntBASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 FAM210CP-201ENST00000445714 574 ntBASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 GCSHP2-201ENST00000560971 527 ntBASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 AC010240.3-201ENST00000607688 395 ntBASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 AC011558.1-201ENST00000623459 338 ntBASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ATPAF1Q5TC12 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF1Q5TC12 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF1Q5TC12 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF1Q5TC12 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
ATPAF1Q5TC12 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF1Q5TC12 LINC00602-201ENST00000629776 2065 ntBASIC15.42■□□□□ 0.06
ATPAF1Q5TC12 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF1Q5TC12 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.42■□□□□ 0.06
ATPAF1Q5TC12 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
ATPAF1Q5TC12 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF1Q5TC12 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF1Q5TC12 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF1Q5TC12 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF1Q5TC12 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF1Q5TC12 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF1Q5TC12 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
ATPAF1Q5TC12 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF1Q5TC12 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF1Q5TC12 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF1Q5TC12 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.42■□□□□ 0.06
ATPAF1Q5TC12 TSPY5P-201ENST00000426936 936 ntBASIC15.42■□□□□ 0.06
ATPAF1Q5TC12 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
ATPAF1Q5TC12 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.42■□□□□ 0.06
ATPAF1Q5TC12 AC104076.2-201ENST00000448912 469 ntBASIC15.42■□□□□ 0.06
ATPAF1Q5TC12 AC034232.1-201ENST00000506026 1064 ntBASIC15.42■□□□□ 0.06
ATPAF1Q5TC12 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF1Q5TC12 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.42■□□□□ 0.06
ATPAF1Q5TC12 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF1Q5TC12 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.42■□□□□ 0.06
ATPAF1Q5TC12 MIR3917-201ENST00000580971 93 ntBASIC15.42■□□□□ 0.06
ATPAF1Q5TC12 AC006011.2-201ENST00000621313 1158 ntBASIC15.42■□□□□ 0.06
ATPAF1Q5TC12 AL023973.1-201ENST00000624619 620 ntBASIC15.42■□□□□ 0.06
ATPAF1Q5TC12 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.42■□□□□ 0.06
ATPAF1Q5TC12 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF1Q5TC12 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms