Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 AC090164.3-201ENST00000610780 2143 ntBASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 AC007967.2-201ENST00000432613 625 ntBASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 KRT18P3-201ENST00000451602 1288 ntBASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 AC006557.2-201ENST00000592985 1240 ntBASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 AC009113.1-201ENST00000570267 2443 ntBASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNFT1Q5M7Z0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 AL591424.1-201ENST00000442569 1213 ntBASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 AL589182.2-201ENST00000619332 1049 ntBASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNFT1Q5M7Z0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 AC006504.4-201ENST00000592118 1568 ntBASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 MIR1233-2-201ENST00000408138 82 ntBASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 MIR1233-1-201ENST00000408722 82 ntBASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 KLF4P1-201ENST00000412782 1185 ntBASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms