Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.17■□□□□ 0.82
LONRF3Q496Y0 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LONRF3Q496Y0 AL121672.3-201ENST00000608644 468 ntBASIC20.17■□□□□ 0.82
LONRF3Q496Y0 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LONRF3Q496Y0 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LONRF3Q496Y0 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LONRF3Q496Y0 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
LONRF3Q496Y0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LONRF3Q496Y0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LONRF3Q496Y0 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
LONRF3Q496Y0 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.17■□□□□ 0.82
LONRF3Q496Y0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LONRF3Q496Y0 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LONRF3Q496Y0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
LONRF3Q496Y0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
LONRF3Q496Y0 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LONRF3Q496Y0 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.17■□□□□ 0.82
LONRF3Q496Y0 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.17■□□□□ 0.82
LONRF3Q496Y0 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LONRF3Q496Y0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LONRF3Q496Y0 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LONRF3Q496Y0 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.16■□□□□ 0.82
LONRF3Q496Y0 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.16■□□□□ 0.82
LONRF3Q496Y0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
LONRF3Q496Y0 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.16■□□□□ 0.82
LONRF3Q496Y0 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LONRF3Q496Y0 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
LONRF3Q496Y0 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LONRF3Q496Y0 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LONRF3Q496Y0 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LONRF3Q496Y0 AP002383.4-201ENST00000442518 975 ntBASIC20.16■□□□□ 0.82
LONRF3Q496Y0 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.16■□□□□ 0.82
LONRF3Q496Y0 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.16■□□□□ 0.82
LONRF3Q496Y0 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
LONRF3Q496Y0 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.16■□□□□ 0.82
LONRF3Q496Y0 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.16■□□□□ 0.82
LONRF3Q496Y0 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
LONRF3Q496Y0 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LONRF3Q496Y0 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.16■□□□□ 0.82
LONRF3Q496Y0 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
LONRF3Q496Y0 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LONRF3Q496Y0 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LONRF3Q496Y0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LONRF3Q496Y0 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.16■□□□□ 0.82
LONRF3Q496Y0 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
LONRF3Q496Y0 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LONRF3Q496Y0 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LONRF3Q496Y0 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LONRF3Q496Y0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LONRF3Q496Y0 LINC00304-203ENST00000565008 1864 ntBASIC20.16■□□□□ 0.82
LONRF3Q496Y0 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
LONRF3Q496Y0 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LONRF3Q496Y0 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LONRF3Q496Y0 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
LONRF3Q496Y0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LONRF3Q496Y0 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LONRF3Q496Y0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LONRF3Q496Y0 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LONRF3Q496Y0 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LONRF3Q496Y0 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
LONRF3Q496Y0 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LONRF3Q496Y0 TSPY22P-201ENST00000427496 604 ntBASIC20.15■□□□□ 0.82
LONRF3Q496Y0 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.15■□□□□ 0.82
LONRF3Q496Y0 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.15■□□□□ 0.82
LONRF3Q496Y0 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.15■□□□□ 0.82
LONRF3Q496Y0 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.15■□□□□ 0.82
LONRF3Q496Y0 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LONRF3Q496Y0 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LONRF3Q496Y0 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LONRF3Q496Y0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
LONRF3Q496Y0 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.15■□□□□ 0.82
LONRF3Q496Y0 REXO1L11P-201ENST00000620964 1927 ntBASIC20.15■□□□□ 0.82
LONRF3Q496Y0 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
LONRF3Q496Y0 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LONRF3Q496Y0 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
LONRF3Q496Y0 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
LONRF3Q496Y0 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.15■□□□□ 0.82
LONRF3Q496Y0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
LONRF3Q496Y0 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
LONRF3Q496Y0 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.14■□□□□ 0.82
LONRF3Q496Y0 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.82
LONRF3Q496Y0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
LONRF3Q496Y0 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LONRF3Q496Y0 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LONRF3Q496Y0 KRT89P-201ENST00000620027 1478 ntBASIC20.14■□□□□ 0.81
LONRF3Q496Y0 KRT8P47-201ENST00000604727 1398 ntBASIC20.14■□□□□ 0.81
LONRF3Q496Y0 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.14■□□□□ 0.81
LONRF3Q496Y0 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LONRF3Q496Y0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LONRF3Q496Y0 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LONRF3Q496Y0 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
LONRF3Q496Y0 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
LONRF3Q496Y0 MIR3180-1-201ENST00000580374 94 ntBASIC20.14■□□□□ 0.81
LONRF3Q496Y0 MIR3180-3-201ENST00000584616 94 ntBASIC20.14■□□□□ 0.81
LONRF3Q496Y0 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
LONRF3Q496Y0 AP002414.4-201ENST00000589764 1148 ntBASIC20.14■□□□□ 0.81
LONRF3Q496Y0 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
LONRF3Q496Y0 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.14■□□□□ 0.81
LONRF3Q496Y0 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LONRF3Q496Y0 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms