Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.15■□□□□ 0.34
CACNA1EQ15878 AC022145.2-201ENST00000598203 171 ntBASIC17.15■□□□□ 0.34
CACNA1EQ15878 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.15■□□□□ 0.34
CACNA1EQ15878 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CACNA1EQ15878 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.15■□□□□ 0.34
CACNA1EQ15878 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CACNA1EQ15878 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CACNA1EQ15878 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
CACNA1EQ15878 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CACNA1EQ15878 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.15■□□□□ 0.34
CACNA1EQ15878 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CACNA1EQ15878 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CACNA1EQ15878 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CACNA1EQ15878 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CACNA1EQ15878 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CACNA1EQ15878 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CACNA1EQ15878 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CACNA1EQ15878 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.14■□□□□ 0.33
CACNA1EQ15878 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CACNA1EQ15878 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.14■□□□□ 0.33
CACNA1EQ15878 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CACNA1EQ15878 AL035252.4-201ENST00000624174 288 ntBASIC17.14■□□□□ 0.33
CACNA1EQ15878 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CACNA1EQ15878 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CACNA1EQ15878 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CACNA1EQ15878 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.14■□□□□ 0.33
CACNA1EQ15878 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CACNA1EQ15878 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CACNA1EQ15878 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
CACNA1EQ15878 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CACNA1EQ15878 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CACNA1EQ15878 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.14■□□□□ 0.33
CACNA1EQ15878 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CACNA1EQ15878 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CACNA1EQ15878 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.14■□□□□ 0.33
CACNA1EQ15878 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.14■□□□□ 0.33
CACNA1EQ15878 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.14■□□□□ 0.33
CACNA1EQ15878 AC007064.4-201ENST00000637740 555 ntBASIC17.14■□□□□ 0.33
CACNA1EQ15878 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CACNA1EQ15878 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CACNA1EQ15878 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.14■□□□□ 0.33
CACNA1EQ15878 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.14■□□□□ 0.33
CACNA1EQ15878 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA1EQ15878 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA1EQ15878 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA1EQ15878 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA1EQ15878 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA1EQ15878 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA1EQ15878 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA1EQ15878 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.13■□□□□ 0.33
CACNA1EQ15878 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA1EQ15878 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.13■□□□□ 0.33
CACNA1EQ15878 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.13■□□□□ 0.33
CACNA1EQ15878 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.13■□□□□ 0.33
CACNA1EQ15878 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.13■□□□□ 0.33
CACNA1EQ15878 AC004449.1-201ENST00000564240 433 ntBASIC17.13■□□□□ 0.33
CACNA1EQ15878 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA1EQ15878 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA1EQ15878 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CACNA1EQ15878 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA1EQ15878 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CACNA1EQ15878 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA1EQ15878 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA1EQ15878 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.13■□□□□ 0.33
CACNA1EQ15878 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.13■□□□□ 0.33
CACNA1EQ15878 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA1EQ15878 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA1EQ15878 AC004461.1-201ENST00000412461 403 ntBASIC17.13■□□□□ 0.33
CACNA1EQ15878 FAM58CP-201ENST00000435741 640 ntBASIC17.13■□□□□ 0.33
CACNA1EQ15878 DDX43P3-201ENST00000441064 443 ntBASIC17.13■□□□□ 0.33
CACNA1EQ15878 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CACNA1EQ15878 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.13■□□□□ 0.33
CACNA1EQ15878 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.13■□□□□ 0.33
CACNA1EQ15878 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA1EQ15878 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA1EQ15878 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.13■□□□□ 0.33
CACNA1EQ15878 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
CACNA1EQ15878 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNA1EQ15878 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.12■□□□□ 0.33
CACNA1EQ15878 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNA1EQ15878 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CACNA1EQ15878 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.12■□□□□ 0.33
CACNA1EQ15878 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CACNA1EQ15878 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.12■□□□□ 0.33
CACNA1EQ15878 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CACNA1EQ15878 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.12■□□□□ 0.33
CACNA1EQ15878 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.12■□□□□ 0.33
CACNA1EQ15878 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.12■□□□□ 0.33
CACNA1EQ15878 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.12■□□□□ 0.33
CACNA1EQ15878 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.12■□□□□ 0.33
CACNA1EQ15878 AC012645.4-201ENST00000610691 1061 ntBASIC17.12■□□□□ 0.33
CACNA1EQ15878 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNA1EQ15878 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CACNA1EQ15878 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.12■□□□□ 0.33
CACNA1EQ15878 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.12■□□□□ 0.33
CACNA1EQ15878 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CACNA1EQ15878 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNA1EQ15878 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNA1EQ15878 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.12■□□□□ 0.33
CACNA1EQ15878 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms