Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH17Q12864 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH17Q12864 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CDH17Q12864 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH17Q12864 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CDH17Q12864 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH17Q12864 AL023806.1-201ENST00000603994 1649 ntBASIC17.92■□□□□ 0.46
CDH17Q12864 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH17Q12864 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.92■□□□□ 0.46
CDH17Q12864 AC096633.1-201ENST00000422446 749 ntBASIC17.92■□□□□ 0.46
CDH17Q12864 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH17Q12864 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.92■□□□□ 0.46
CDH17Q12864 GUSBP12-201ENST00000513727 720 ntBASIC17.92■□□□□ 0.46
CDH17Q12864 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.92■□□□□ 0.46
CDH17Q12864 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH17Q12864 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH17Q12864 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CDH17Q12864 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH17Q12864 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CDH17Q12864 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH17Q12864 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CDH17Q12864 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH17Q12864 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH17Q12864 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CDH17Q12864 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH17Q12864 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH17Q12864 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH17Q12864 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH17Q12864 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH17Q12864 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH17Q12864 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH17Q12864 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH17Q12864 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH17Q12864 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH17Q12864 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH17Q12864 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH17Q12864 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.91■□□□□ 0.46
CDH17Q12864 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH17Q12864 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH17Q12864 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH17Q12864 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CDH17Q12864 TSPY22P-201ENST00000427496 604 ntBASIC17.91■□□□□ 0.46
CDH17Q12864 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
CDH17Q12864 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH17Q12864 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CDH17Q12864 AL136038.3-201ENST00000561909 1096 ntBASIC17.91■□□□□ 0.46
CDH17Q12864 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH17Q12864 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH17Q12864 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH17Q12864 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH17Q12864 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CDH17Q12864 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.91■□□□□ 0.46
CDH17Q12864 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH17Q12864 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH17Q12864 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH17Q12864 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH17Q12864 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
CDH17Q12864 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH17Q12864 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CDH17Q12864 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDH17Q12864 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH17Q12864 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH17Q12864 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDH17Q12864 AC108860.2-201ENST00000562760 2183 ntBASIC17.9■□□□□ 0.46
CDH17Q12864 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.9■□□□□ 0.46
CDH17Q12864 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CDH17Q12864 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH17Q12864 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CDH17Q12864 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH17Q12864 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH17Q12864 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CDH17Q12864 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CDH17Q12864 SIRPAP1-201ENST00000448467 1770 ntBASIC17.9■□□□□ 0.46
CDH17Q12864 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.9■□□□□ 0.46
CDH17Q12864 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CDH17Q12864 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH17Q12864 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
CDH17Q12864 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.9■□□□□ 0.46
CDH17Q12864 AC005104.2-201ENST00000427818 678 ntBASIC17.9■□□□□ 0.46
CDH17Q12864 KRT18P21-201ENST00000515767 1272 ntBASIC17.9■□□□□ 0.46
CDH17Q12864 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CDH17Q12864 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.9■□□□□ 0.46
CDH17Q12864 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDH17Q12864 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.9■□□□□ 0.46
CDH17Q12864 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.9■□□□□ 0.46
CDH17Q12864 AC097374.2-201ENST00000618617 1306 ntBASIC17.9■□□□□ 0.46
CDH17Q12864 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH17Q12864 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH17Q12864 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.9■□□□□ 0.46
CDH17Q12864 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH17Q12864 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.9■□□□□ 0.46
CDH17Q12864 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH17Q12864 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CDH17Q12864 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.89■□□□□ 0.46
CDH17Q12864 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.89■□□□□ 0.45
CDH17Q12864 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH17Q12864 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDH17Q12864 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH17Q12864 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH17Q12864 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms