Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.64■□□□□ 0.09
NKX6-1P78426 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.64■□□□□ 0.09
NKX6-1P78426 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.64■□□□□ 0.09
NKX6-1P78426 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
NKX6-1P78426 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-1P78426 AF238378.1-201ENST00000526806 358 ntBASIC15.64■□□□□ 0.09
NKX6-1P78426 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
NKX6-1P78426 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.64■□□□□ 0.09
NKX6-1P78426 AL592071.1-201ENST00000611956 408 ntBASIC15.64■□□□□ 0.09
NKX6-1P78426 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-1P78426 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-1P78426 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.64■□□□□ 0.09
NKX6-1P78426 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.64■□□□□ 0.09
NKX6-1P78426 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.64■□□□□ 0.09
NKX6-1P78426 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-1P78426 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-1P78426 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-1P78426 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-1P78426 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-1P78426 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.64■□□□□ 0.09
NKX6-1P78426 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NKX6-1P78426 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.63■□□□□ 0.09
NKX6-1P78426 NSUN5P1-202ENST00000421140 1535 ntBASIC15.63■□□□□ 0.09
NKX6-1P78426 NSUN5P2-203ENST00000457352 1529 ntBASIC15.63■□□□□ 0.09
NKX6-1P78426 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NKX6-1P78426 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
NKX6-1P78426 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
NKX6-1P78426 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NKX6-1P78426 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NKX6-1P78426 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.63■□□□□ 0.09
NKX6-1P78426 CROCCP1-201ENST00000426910 5675 ntBASIC15.63■□□□□ 0.09
NKX6-1P78426 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NKX6-1P78426 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NKX6-1P78426 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.63■□□□□ 0.09
NKX6-1P78426 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
NKX6-1P78426 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
NKX6-1P78426 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NKX6-1P78426 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.63■□□□□ 0.09
NKX6-1P78426 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.63■□□□□ 0.09
NKX6-1P78426 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NKX6-1P78426 FAM197Y8-203ENST00000450145 560 ntBASIC15.63■□□□□ 0.09
NKX6-1P78426 MINOS1P3-201ENST00000457048 203 ntBASIC15.63■□□□□ 0.09
NKX6-1P78426 AC093909.1-201ENST00000504731 1122 ntBASIC15.63■□□□□ 0.09
NKX6-1P78426 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.63■□□□□ 0.09
NKX6-1P78426 KRT18P58-201ENST00000527480 1120 ntBASIC15.63■□□□□ 0.09
NKX6-1P78426 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NKX6-1P78426 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.63■□□□□ 0.09
NKX6-1P78426 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.63■□□□□ 0.09
NKX6-1P78426 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
NKX6-1P78426 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
NKX6-1P78426 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NKX6-1P78426 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.63■□□□□ 0.09
NKX6-1P78426 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NKX6-1P78426 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
NKX6-1P78426 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
NKX6-1P78426 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC15.63■□□□□ 0.09
NKX6-1P78426 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX6-1P78426 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX6-1P78426 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX6-1P78426 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX6-1P78426 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX6-1P78426 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX6-1P78426 ESPNP-201ENST00000270691 2015 ntBASIC15.62■□□□□ 0.09
NKX6-1P78426 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX6-1P78426 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NKX6-1P78426 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.62■□□□□ 0.09
NKX6-1P78426 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NKX6-1P78426 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX6-1P78426 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
NKX6-1P78426 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX6-1P78426 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX6-1P78426 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NKX6-1P78426 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX6-1P78426 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.62■□□□□ 0.09
NKX6-1P78426 MIR1233-2-201ENST00000408138 82 ntBASIC15.62■□□□□ 0.09
NKX6-1P78426 MIR1233-1-201ENST00000408722 82 ntBASIC15.62■□□□□ 0.09
NKX6-1P78426 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.62■□□□□ 0.09
NKX6-1P78426 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
NKX6-1P78426 RN7SL606P-201ENST00000472779 293 ntBASIC15.62■□□□□ 0.09
NKX6-1P78426 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.62■□□□□ 0.09
NKX6-1P78426 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NKX6-1P78426 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.62■□□□□ 0.09
NKX6-1P78426 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.62■□□□□ 0.09
NKX6-1P78426 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX6-1P78426 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.62■□□□□ 0.09
NKX6-1P78426 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX6-1P78426 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.62■□□□□ 0.09
NKX6-1P78426 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX6-1P78426 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.62■□□□□ 0.09
NKX6-1P78426 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX6-1P78426 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX6-1P78426 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX6-1P78426 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX6-1P78426 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX6-1P78426 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
NKX6-1P78426 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX6-1P78426 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC15.62■□□□□ 0.09
NKX6-1P78426 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
NKX6-1P78426 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX6-1P78426 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms