Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2D3P61077 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2D3P61077 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
UBE2D3P61077 AC132938.6-201ENST00000623828 1655 ntBASIC12.67□□□□□ -0.38
UBE2D3P61077 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2D3P61077 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2D3P61077 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2D3P61077 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2D3P61077 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2D3P61077 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
UBE2D3P61077 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D3P61077 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
UBE2D3P61077 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D3P61077 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D3P61077 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
UBE2D3P61077 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC12.66□□□□□ -0.38
UBE2D3P61077 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
UBE2D3P61077 AL121761.2-201ENST00000598007 1648 ntBASIC12.66□□□□□ -0.38
UBE2D3P61077 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D3P61077 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D3P61077 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D3P61077 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
UBE2D3P61077 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D3P61077 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC12.66□□□□□ -0.38
UBE2D3P61077 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
UBE2D3P61077 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D3P61077 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D3P61077 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D3P61077 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D3P61077 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
UBE2D3P61077 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D3P61077 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
UBE2D3P61077 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D3P61077 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D3P61077 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC12.66□□□□□ -0.38
UBE2D3P61077 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
UBE2D3P61077 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
UBE2D3P61077 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D3P61077 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC12.66□□□□□ -0.38
UBE2D3P61077 TSPY15P-201ENST00000457163 923 ntBASIC12.66□□□□□ -0.38
UBE2D3P61077 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC12.66□□□□□ -0.38
UBE2D3P61077 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC12.66□□□□□ -0.38
UBE2D3P61077 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC12.66□□□□□ -0.38
UBE2D3P61077 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC12.66□□□□□ -0.38
UBE2D3P61077 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
UBE2D3P61077 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D3P61077 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC12.66□□□□□ -0.38
UBE2D3P61077 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D3P61077 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D3P61077 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
UBE2D3P61077 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D3P61077 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D3P61077 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
UBE2D3P61077 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D3P61077 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC12.66□□□□□ -0.38
UBE2D3P61077 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D3P61077 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D3P61077 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
UBE2D3P61077 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D3P61077 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D3P61077 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D3P61077 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D3P61077 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC12.66□□□□□ -0.38
UBE2D3P61077 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D3P61077 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D3P61077 PBK-203ENST00000522944 1499 ntTSL 2 BASIC12.65□□□□□ -0.38
UBE2D3P61077 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D3P61077 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D3P61077 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D3P61077 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D3P61077 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
UBE2D3P61077 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D3P61077 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D3P61077 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D3P61077 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D3P61077 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
UBE2D3P61077 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
UBE2D3P61077 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
UBE2D3P61077 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D3P61077 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC12.65□□□□□ -0.38
UBE2D3P61077 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
UBE2D3P61077 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
UBE2D3P61077 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC12.65□□□□□ -0.38
UBE2D3P61077 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D3P61077 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D3P61077 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D3P61077 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC12.65□□□□□ -0.38
UBE2D3P61077 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D3P61077 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D3P61077 Telomerase-vert.1-201ENST00000363312 438 ntBASIC12.65□□□□□ -0.38
UBE2D3P61077 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D3P61077 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC12.65□□□□□ -0.38
UBE2D3P61077 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC12.65□□□□□ -0.38
UBE2D3P61077 PVRIG2P-201ENST00000435460 978 ntBASIC12.65□□□□□ -0.38
UBE2D3P61077 ECEL1P2-202ENST00000465689 757 ntBASIC12.65□□□□□ -0.38
UBE2D3P61077 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D3P61077 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC12.65□□□□□ -0.38
UBE2D3P61077 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC12.65□□□□□ -0.38
UBE2D3P61077 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC12.65□□□□□ -0.38
UBE2D3P61077 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms