Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP4BP1P59074 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.27■□□□□ 0.83
CHMP4BP1P59074 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CHMP4BP1P59074 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.27■□□□□ 0.83
CHMP4BP1P59074 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.27■□□□□ 0.83
CHMP4BP1P59074 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.83
CHMP4BP1P59074 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP4BP1P59074 LINC00602-201ENST00000629776 2065 ntBASIC20.26■□□□□ 0.83
CHMP4BP1P59074 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.26■□□□□ 0.83
CHMP4BP1P59074 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.26■□□□□ 0.83
CHMP4BP1P59074 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CHMP4BP1P59074 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CHMP4BP1P59074 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP4BP1P59074 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP4BP1P59074 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP4BP1P59074 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP4BP1P59074 SDHAP2-201ENST00000455183 2001 ntBASIC20.26■□□□□ 0.83
CHMP4BP1P59074 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.26■□□□□ 0.83
CHMP4BP1P59074 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP4BP1P59074 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP4BP1P59074 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.26■□□□□ 0.83
CHMP4BP1P59074 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CHMP4BP1P59074 AC064862.7-201ENST00000604520 867 ntBASIC20.26■□□□□ 0.83
CHMP4BP1P59074 AC008608.2-201ENST00000606089 416 ntBASIC20.26■□□□□ 0.83
CHMP4BP1P59074 AC023511.2-201ENST00000618803 211 ntBASIC20.26■□□□□ 0.83
CHMP4BP1P59074 AC148477.8-201ENST00000624298 468 ntBASIC20.26■□□□□ 0.83
CHMP4BP1P59074 AF228730.7-201ENST00000641842 219 ntBASIC20.26■□□□□ 0.83
CHMP4BP1P59074 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.26■□□□□ 0.83
CHMP4BP1P59074 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.26■□□□□ 0.83
CHMP4BP1P59074 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP4BP1P59074 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CHMP4BP1P59074 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP4BP1P59074 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CHMP4BP1P59074 AC012313.1-201ENST00000593393 3059 ntBASIC20.25■□□□□ 0.83
CHMP4BP1P59074 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CHMP4BP1P59074 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP4BP1P59074 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP4BP1P59074 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP4BP1P59074 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP4BP1P59074 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP4BP1P59074 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP4BP1P59074 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP4BP1P59074 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP4BP1P59074 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.25■□□□□ 0.83
CHMP4BP1P59074 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP4BP1P59074 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP4BP1P59074 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP4BP1P59074 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP4BP1P59074 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.25■□□□□ 0.83
CHMP4BP1P59074 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP4BP1P59074 RCN1P2-201ENST00000398357 915 ntBASIC20.25■□□□□ 0.83
CHMP4BP1P59074 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.25■□□□□ 0.83
CHMP4BP1P59074 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.25■□□□□ 0.83
CHMP4BP1P59074 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP4BP1P59074 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.25■□□□□ 0.83
CHMP4BP1P59074 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP4BP1P59074 GPALPP1-207ENST00000611650 899 ntBASIC20.25■□□□□ 0.83
CHMP4BP1P59074 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.25■□□□□ 0.83
CHMP4BP1P59074 AL773604.1-201ENST00000617417 272 ntBASIC20.25■□□□□ 0.83
CHMP4BP1P59074 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.25■□□□□ 0.83
CHMP4BP1P59074 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP4BP1P59074 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP4BP1P59074 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
CHMP4BP1P59074 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP4BP1P59074 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CHMP4BP1P59074 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP4BP1P59074 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP4BP1P59074 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP4BP1P59074 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP4BP1P59074 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CHMP4BP1P59074 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP4BP1P59074 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP4BP1P59074 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.24■□□□□ 0.83
CHMP4BP1P59074 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP4BP1P59074 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
CHMP4BP1P59074 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP4BP1P59074 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP4BP1P59074 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP4BP1P59074 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CHMP4BP1P59074 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP4BP1P59074 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP4BP1P59074 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP4BP1P59074 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP4BP1P59074 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP4BP1P59074 AF186996.4-201ENST00000467186 377 ntBASIC20.24■□□□□ 0.83
CHMP4BP1P59074 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.24■□□□□ 0.83
CHMP4BP1P59074 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CHMP4BP1P59074 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.24■□□□□ 0.83
CHMP4BP1P59074 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CHMP4BP1P59074 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.24■□□□□ 0.83
CHMP4BP1P59074 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.24■□□□□ 0.83
CHMP4BP1P59074 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.24■□□□□ 0.83
CHMP4BP1P59074 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.24■□□□□ 0.83
CHMP4BP1P59074 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP4BP1P59074 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP4BP1P59074 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP4BP1P59074 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP4BP1P59074 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.24■□□□□ 0.83
CHMP4BP1P59074 IL9RP2-201ENST00000423948 1312 ntBASIC20.24■□□□□ 0.83
CHMP4BP1P59074 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms