Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 COX11P1-201ENST00000489116 835 ntBASIC17.36■□□□□ 0.37
CDH13P55290 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.36■□□□□ 0.37
CDH13P55290 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.36■□□□□ 0.37
CDH13P55290 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CDH13P55290 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.36■□□□□ 0.37
CDH13P55290 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CDH13P55290 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.36■□□□□ 0.37
CDH13P55290 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH13P55290 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.36■□□□□ 0.37
CDH13P55290 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.36■□□□□ 0.37
CDH13P55290 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CDH13P55290 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.36■□□□□ 0.37
CDH13P55290 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH13P55290 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH13P55290 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CDH13P55290 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
CDH13P55290 AD000864.1-201ENST00000624076 2295 ntBASIC17.36■□□□□ 0.37
CDH13P55290 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.36■□□□□ 0.37
CDH13P55290 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.36■□□□□ 0.37
CDH13P55290 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH13P55290 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CDH13P55290 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH13P55290 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH13P55290 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH13P55290 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CDH13P55290 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CDH13P55290 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH13P55290 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH13P55290 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.35■□□□□ 0.37
CDH13P55290 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.35■□□□□ 0.37
CDH13P55290 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CDH13P55290 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH13P55290 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH13P55290 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH13P55290 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.35■□□□□ 0.37
CDH13P55290 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH13P55290 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH13P55290 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH13P55290 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH13P55290 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.35■□□□□ 0.37
CDH13P55290 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH13P55290 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CDH13P55290 AC011558.1-201ENST00000623459 338 ntBASIC17.35■□□□□ 0.37
CDH13P55290 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH13P55290 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CDH13P55290 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.35■□□□□ 0.37
CDH13P55290 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH13P55290 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.35■□□□□ 0.37
CDH13P55290 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH13P55290 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH13P55290 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH13P55290 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH13P55290 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH13P55290 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.34■□□□□ 0.37
CDH13P55290 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.34■□□□□ 0.37
CDH13P55290 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH13P55290 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.34■□□□□ 0.37
CDH13P55290 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CDH13P55290 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CDH13P55290 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH13P55290 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH13P55290 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH13P55290 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CDH13P55290 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH13P55290 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH13P55290 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CDH13P55290 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDH13P55290 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.34■□□□□ 0.37
CDH13P55290 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDH13P55290 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.34■□□□□ 0.37
CDH13P55290 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH13P55290 KRT18P48-201ENST00000434763 852 ntBASIC17.34■□□□□ 0.37
CDH13P55290 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH13P55290 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH13P55290 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.34■□□□□ 0.37
CDH13P55290 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH13P55290 AC092597.1-201ENST00000487352 616 ntBASIC17.34■□□□□ 0.37
CDH13P55290 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDH13P55290 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH13P55290 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.34■□□□□ 0.37
CDH13P55290 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.34■□□□□ 0.37
CDH13P55290 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.34■□□□□ 0.37
CDH13P55290 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH13P55290 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.34■□□□□ 0.37
CDH13P55290 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.34■□□□□ 0.37
CDH13P55290 LINC01451-201ENST00000623792 534 ntBASIC17.34■□□□□ 0.37
CDH13P55290 AC133561.5-201ENST00000635547 218 ntBASIC17.34■□□□□ 0.37
CDH13P55290 AL031432.5-201ENST00000641059 760 ntBASIC17.34■□□□□ 0.37
CDH13P55290 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.34■□□□□ 0.37
CDH13P55290 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH13P55290 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.34■□□□□ 0.37
CDH13P55290 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH13P55290 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH13P55290 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.33■□□□□ 0.37
CDH13P55290 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDH13P55290 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
CDH13P55290 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
CDH13P55290 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDH13P55290 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDH13P55290 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms