Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AP000344.2-201ENST00000512987 629 ntBASIC15.39■□□□□ 0.05
HCFC1P51610 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.39■□□□□ 0.05
HCFC1P51610 RFPL4AP1-201ENST00000530883 850 ntBASIC15.39■□□□□ 0.05
HCFC1P51610 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HCFC1P51610 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.39■□□□□ 0.05
HCFC1P51610 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HCFC1P51610 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HCFC1P51610 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HCFC1P51610 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HCFC1P51610 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
HCFC1P51610 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HCFC1P51610 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HCFC1P51610 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
HCFC1P51610 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.38■□□□□ 0.05
HCFC1P51610 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HCFC1P51610 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.38■□□□□ 0.05
HCFC1P51610 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.38■□□□□ 0.05
HCFC1P51610 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC15.38■□□□□ 0.05
HCFC1P51610 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HCFC1P51610 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC15.38■□□□□ 0.05
HCFC1P51610 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HCFC1P51610 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
HCFC1P51610 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.38■□□□□ 0.05
HCFC1P51610 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HCFC1P51610 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.38■□□□□ 0.05
HCFC1P51610 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.38■□□□□ 0.05
HCFC1P51610 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.38■□□□□ 0.05
HCFC1P51610 SPCS2P1-201ENST00000561636 679 ntBASIC15.38■□□□□ 0.05
HCFC1P51610 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.38■□□□□ 0.05
HCFC1P51610 AC008667.4-201ENST00000607370 168 ntBASIC15.38■□□□□ 0.05
HCFC1P51610 AL078644.1-201ENST00000609881 752 ntBASIC15.38■□□□□ 0.05
HCFC1P51610 AL513190.1-201ENST00000621254 727 ntBASIC15.38■□□□□ 0.05
HCFC1P51610 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.38■□□□□ 0.05
HCFC1P51610 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.38■□□□□ 0.05
HCFC1P51610 AC079781.4-201ENST00000641908 219 ntBASIC15.38■□□□□ 0.05
HCFC1P51610 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.38■□□□□ 0.05
HCFC1P51610 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
HCFC1P51610 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HCFC1P51610 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HCFC1P51610 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HCFC1P51610 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
HCFC1P51610 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
HCFC1P51610 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HCFC1P51610 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HCFC1P51610 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HCFC1P51610 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.38■□□□□ 0.05
HCFC1P51610 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HCFC1P51610 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HCFC1P51610 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HCFC1P51610 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
HCFC1P51610 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HCFC1P51610 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.38■□□□□ 0.05
HCFC1P51610 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.38■□□□□ 0.05
HCFC1P51610 AC073592.5-201ENST00000624854 528 ntBASIC15.38■□□□□ 0.05
HCFC1P51610 AC005593.1-201ENST00000624894 515 ntBASIC15.38■□□□□ 0.05
HCFC1P51610 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.38■□□□□ 0.05
HCFC1P51610 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC1P51610 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC1P51610 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC1P51610 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC1P51610 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.37■□□□□ 0.05
HCFC1P51610 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC15.37■□□□□ 0.05
HCFC1P51610 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC1P51610 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC1P51610 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC1P51610 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
HCFC1P51610 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC1P51610 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
HCFC1P51610 SPDYE21P-201ENST00000413323 827 ntBASIC15.37■□□□□ 0.05
HCFC1P51610 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.37■□□□□ 0.05
HCFC1P51610 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.37■□□□□ 0.05
HCFC1P51610 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
HCFC1P51610 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.37■□□□□ 0.05
HCFC1P51610 AL589182.2-201ENST00000619332 1049 ntBASIC15.37■□□□□ 0.05
HCFC1P51610 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC1P51610 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC1P51610 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC1P51610 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.36■□□□□ 0.05
HCFC1P51610 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1P51610 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1P51610 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.36■□□□□ 0.05
HCFC1P51610 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.36■□□□□ 0.05
HCFC1P51610 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1P51610 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1P51610 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.36■□□□□ 0.05
HCFC1P51610 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.36■□□□□ 0.05
HCFC1P51610 CYMP-203ENST00000474680 1263 ntBASIC15.36■□□□□ 0.05
HCFC1P51610 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.36■□□□□ 0.05
HCFC1P51610 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.36■□□□□ 0.05
HCFC1P51610 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.36■□□□□ 0.05
HCFC1P51610 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1P51610 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.36■□□□□ 0.05
HCFC1P51610 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1P51610 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1P51610 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1P51610 AC126763.1-201ENST00000552015 2118 ntBASIC15.36■□□□□ 0.05
HCFC1P51610 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1P51610 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1P51610 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC15.36■□□□□ 0.05
HCFC1P51610 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms