Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.13■□□□□ 0.33
RAB28P51157 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB28P51157 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB28P51157 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB28P51157 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.13■□□□□ 0.33
RAB28P51157 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB28P51157 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB28P51157 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.13■□□□□ 0.33
RAB28P51157 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB28P51157 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB28P51157 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB28P51157 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RAB28P51157 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RAB28P51157 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB28P51157 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB28P51157 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB28P51157 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB28P51157 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB28P51157 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.12■□□□□ 0.33
RAB28P51157 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RAB28P51157 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB28P51157 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.12■□□□□ 0.33
RAB28P51157 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.12■□□□□ 0.33
RAB28P51157 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.12■□□□□ 0.33
RAB28P51157 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB28P51157 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.12■□□□□ 0.33
RAB28P51157 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.12■□□□□ 0.33
RAB28P51157 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.12■□□□□ 0.33
RAB28P51157 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB28P51157 IFNL4P1-201ENST00000607083 540 ntBASIC17.12■□□□□ 0.33
RAB28P51157 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RAB28P51157 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB28P51157 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB28P51157 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB28P51157 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB28P51157 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
RAB28P51157 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB28P51157 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB28P51157 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.12■□□□□ 0.33
RAB28P51157 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB28P51157 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB28P51157 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB28P51157 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB28P51157 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
RAB28P51157 AC018470.1-201ENST00000624790 3129 ntBASIC17.11■□□□□ 0.33
RAB28P51157 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB28P51157 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB28P51157 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB28P51157 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB28P51157 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RAB28P51157 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB28P51157 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB28P51157 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.11■□□□□ 0.33
RAB28P51157 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.11■□□□□ 0.33
RAB28P51157 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.11■□□□□ 0.33
RAB28P51157 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB28P51157 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB28P51157 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB28P51157 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB28P51157 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB28P51157 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB28P51157 NOC2LP2-201ENST00000407594 1944 ntBASIC17.11■□□□□ 0.33
RAB28P51157 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB28P51157 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB28P51157 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB28P51157 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB28P51157 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RAB28P51157 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB28P51157 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB28P51157 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB28P51157 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RAB28P51157 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
RAB28P51157 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB28P51157 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
RAB28P51157 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
RAB28P51157 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RAB28P51157 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB28P51157 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB28P51157 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RAB28P51157 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB28P51157 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.1■□□□□ 0.33
RAB28P51157 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB28P51157 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB28P51157 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB28P51157 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB28P51157 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.1■□□□□ 0.33
RAB28P51157 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB28P51157 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.1■□□□□ 0.33
RAB28P51157 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.1■□□□□ 0.33
RAB28P51157 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB28P51157 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.1■□□□□ 0.33
RAB28P51157 AL691432.3-201ENST00000621860 400 ntBASIC17.1■□□□□ 0.33
RAB28P51157 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB28P51157 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB28P51157 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB28P51157 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB28P51157 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB28P51157 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB28P51157 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RAB28P51157 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms