Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC9A3P48764 NKILA-202ENST00000614771 2598 ntBASIC16.31■□□□□ 0.2
SLC9A3P48764 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC9A3P48764 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC9A3P48764 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SLC9A3P48764 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC9A3P48764 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC9A3P48764 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SLC9A3P48764 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC9A3P48764 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
SLC9A3P48764 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC9A3P48764 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SLC9A3P48764 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC9A3P48764 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SLC9A3P48764 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC9A3P48764 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC9A3P48764 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.3■□□□□ 0.2
SLC9A3P48764 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC9A3P48764 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC9A3P48764 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.3■□□□□ 0.2
SLC9A3P48764 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC9A3P48764 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.3■□□□□ 0.2
SLC9A3P48764 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC9A3P48764 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC9A3P48764 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC9A3P48764 ECEL1P3-201ENST00000427961 737 ntBASIC16.3■□□□□ 0.2
SLC9A3P48764 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC9A3P48764 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.3■□□□□ 0.2
SLC9A3P48764 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.3■□□□□ 0.2
SLC9A3P48764 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC9A3P48764 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SLC9A3P48764 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SLC9A3P48764 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC9A3P48764 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC9A3P48764 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SLC9A3P48764 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
SLC9A3P48764 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
SLC9A3P48764 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC9A3P48764 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC9A3P48764 AL023806.1-201ENST00000603994 1649 ntBASIC16.3■□□□□ 0.2
SLC9A3P48764 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC9A3P48764 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SLC9A3P48764 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC9A3P48764 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC9A3P48764 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC9A3P48764 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC9A3P48764 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC9A3P48764 AC022211.2-201ENST00000585075 2527 ntBASIC16.29■□□□□ 0.2
SLC9A3P48764 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC9A3P48764 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC9A3P48764 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC9A3P48764 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC9A3P48764 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC9A3P48764 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC9A3P48764 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC9A3P48764 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC9A3P48764 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC9A3P48764 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC9A3P48764 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SLC9A3P48764 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC9A3P48764 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC9A3P48764 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC9A3P48764 AC113404.2-201ENST00000507884 177 ntBASIC16.29■□□□□ 0.2
SLC9A3P48764 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC9A3P48764 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC9A3P48764 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC9A3P48764 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SLC9A3P48764 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC9A3P48764 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC9A3P48764 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SLC9A3P48764 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC9A3P48764 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC9A3P48764 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC9A3P48764 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC9A3P48764 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SLC9A3P48764 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC9A3P48764 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SLC9A3P48764 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC9A3P48764 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC9A3P48764 AC011676.5-201ENST00000624864 2660 ntBASIC16.29■□□□□ 0.2
SLC9A3P48764 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
SLC9A3P48764 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC9A3P48764 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC9A3P48764 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC9A3P48764 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC9A3P48764 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC9A3P48764 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC9A3P48764 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SLC9A3P48764 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
SLC9A3P48764 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC9A3P48764 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SLC9A3P48764 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC9A3P48764 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC9A3P48764 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SLC9A3P48764 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
SLC9A3P48764 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC9A3P48764 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.28■□□□□ 0.2
SLC9A3P48764 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.28■□□□□ 0.2
SLC9A3P48764 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC9A3P48764 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms