Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CBX5P45973 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CBX5P45973 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CBX5P45973 AC233263.1-201ENST00000578059 224 ntBASIC15.31■□□□□ 0.04
CBX5P45973 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC15.31■□□□□ 0.04
CBX5P45973 MIR6786-201ENST00000616843 113 ntBASIC15.31■□□□□ 0.04
CBX5P45973 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.31■□□□□ 0.04
CBX5P45973 AC126755.1-201ENST00000525846 6405 ntBASIC15.31■□□□□ 0.04
CBX5P45973 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CBX5P45973 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CBX5P45973 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CBX5P45973 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.31■□□□□ 0.04
CBX5P45973 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.31■□□□□ 0.04
CBX5P45973 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CBX5P45973 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CBX5P45973 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CBX5P45973 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CBX5P45973 LINC00602-201ENST00000629776 2065 ntBASIC15.31■□□□□ 0.04
CBX5P45973 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CBX5P45973 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CBX5P45973 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CBX5P45973 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
CBX5P45973 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CBX5P45973 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CBX5P45973 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.3■□□□□ 0.04
CBX5P45973 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CBX5P45973 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CBX5P45973 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CBX5P45973 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CBX5P45973 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CBX5P45973 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CBX5P45973 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CBX5P45973 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.3■□□□□ 0.04
CBX5P45973 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CBX5P45973 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CBX5P45973 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CBX5P45973 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CBX5P45973 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
CBX5P45973 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CBX5P45973 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.3■□□□□ 0.04
CBX5P45973 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.3■□□□□ 0.04
CBX5P45973 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CBX5P45973 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CBX5P45973 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.3■□□□□ 0.04
CBX5P45973 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC15.3■□□□□ 0.04
CBX5P45973 AP000692.2-201ENST00000608391 879 ntBASIC15.3■□□□□ 0.04
CBX5P45973 AC080080.1-201ENST00000625121 2420 ntBASIC15.3■□□□□ 0.04
CBX5P45973 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC15.3■□□□□ 0.04
CBX5P45973 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CBX5P45973 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.3■□□□□ 0.04
CBX5P45973 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CBX5P45973 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CBX5P45973 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CBX5P45973 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CBX5P45973 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CBX5P45973 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CBX5P45973 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CBX5P45973 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX5P45973 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CBX5P45973 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
CBX5P45973 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX5P45973 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CBX5P45973 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CBX5P45973 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.29■□□□□ 0.04
CBX5P45973 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.29■□□□□ 0.04
CBX5P45973 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.29■□□□□ 0.04
CBX5P45973 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
CBX5P45973 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CBX5P45973 AC036111.1-201ENST00000533973 1582 ntBASIC15.29■□□□□ 0.04
CBX5P45973 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX5P45973 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.29■□□□□ 0.04
CBX5P45973 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CBX5P45973 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CBX5P45973 FSCN1P1-201ENST00000568912 1481 ntBASIC15.29■□□□□ 0.04
CBX5P45973 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CBX5P45973 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX5P45973 HOXB1-202ENST00000577092 1414 ntBASIC15.29■□□□□ 0.04
CBX5P45973 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX5P45973 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.29■□□□□ 0.04
CBX5P45973 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CBX5P45973 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX5P45973 ISG20-202ENST00000379224 540 ntTSL 3 BASIC15.29■□□□□ 0.04
CBX5P45973 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CBX5P45973 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX5P45973 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
CBX5P45973 DUTP2-201ENST00000519164 463 ntBASIC15.29■□□□□ 0.04
CBX5P45973 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.29■□□□□ 0.04
CBX5P45973 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
CBX5P45973 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC15.29■□□□□ 0.04
CBX5P45973 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
CBX5P45973 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX5P45973 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.29■□□□□ 0.04
CBX5P45973 AC005052.1-201ENST00000625181 2492 ntBASIC15.29■□□□□ 0.04
CBX5P45973 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX5P45973 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
CBX5P45973 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX5P45973 AP001094.4-201ENST00000579008 2176 ntBASIC15.29■□□□□ 0.04
CBX5P45973 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.29■□□□□ 0.04
CBX5P45973 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.29■□□□□ 0.04
CBX5P45973 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms