Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF9P41273 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.16■□□□□ 0.66
TNFSF9P41273 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.16■□□□□ 0.66
TNFSF9P41273 AC109462.3-201ENST00000573934 613 ntBASIC19.16■□□□□ 0.66
TNFSF9P41273 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.16■□□□□ 0.66
TNFSF9P41273 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF9P41273 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.16■□□□□ 0.66
TNFSF9P41273 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.16■□□□□ 0.66
TNFSF9P41273 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TNFSF9P41273 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TNFSF9P41273 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TNFSF9P41273 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF9P41273 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TNFSF9P41273 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF9P41273 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF9P41273 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.16■□□□□ 0.66
TNFSF9P41273 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.15■□□□□ 0.66
TNFSF9P41273 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFSF9P41273 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.15■□□□□ 0.66
TNFSF9P41273 PMPCAP1-201ENST00000508114 1576 ntBASIC19.15■□□□□ 0.66
TNFSF9P41273 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TNFSF9P41273 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
TNFSF9P41273 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
TNFSF9P41273 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TNFSF9P41273 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFSF9P41273 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFSF9P41273 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TNFSF9P41273 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
TNFSF9P41273 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.15■□□□□ 0.66
TNFSF9P41273 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TNFSF9P41273 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.15■□□□□ 0.66
TNFSF9P41273 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.15■□□□□ 0.66
TNFSF9P41273 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TNFSF9P41273 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.15■□□□□ 0.66
TNFSF9P41273 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.15■□□□□ 0.66
TNFSF9P41273 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFSF9P41273 AC067852.2-201ENST00000590513 2313 ntBASIC19.15■□□□□ 0.66
TNFSF9P41273 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.15■□□□□ 0.66
TNFSF9P41273 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFSF9P41273 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TNFSF9P41273 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFSF9P41273 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TNFSF9P41273 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFSF9P41273 AL353593.2-201ENST00000602529 1483 ntBASIC19.15■□□□□ 0.66
TNFSF9P41273 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.15■□□□□ 0.66
TNFSF9P41273 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFSF9P41273 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFSF9P41273 AC068880.1-201ENST00000507289 2297 ntBASIC19.14■□□□□ 0.66
TNFSF9P41273 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.14■□□□□ 0.66
TNFSF9P41273 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.14■□□□□ 0.66
TNFSF9P41273 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFSF9P41273 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TNFSF9P41273 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
TNFSF9P41273 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFSF9P41273 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFSF9P41273 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFSF9P41273 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.14■□□□□ 0.65
TNFSF9P41273 RBM17P3-201ENST00000417687 1192 ntBASIC19.14■□□□□ 0.65
TNFSF9P41273 AC026396.1-201ENST00000419388 421 ntBASIC19.14■□□□□ 0.65
TNFSF9P41273 AC103564.2-201ENST00000432853 1299 ntBASIC19.14■□□□□ 0.65
TNFSF9P41273 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
TNFSF9P41273 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TNFSF9P41273 AP002469.2-201ENST00000531724 424 ntBASIC19.14■□□□□ 0.65
TNFSF9P41273 AL160237.2-201ENST00000556165 472 ntBASIC19.14■□□□□ 0.65
TNFSF9P41273 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.14■□□□□ 0.65
TNFSF9P41273 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.14■□□□□ 0.65
TNFSF9P41273 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.14■□□□□ 0.65
TNFSF9P41273 AC134043.2-201ENST00000624206 2238 ntBASIC19.14■□□□□ 0.65
TNFSF9P41273 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TNFSF9P41273 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFSF9P41273 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.14■□□□□ 0.65
TNFSF9P41273 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFSF9P41273 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFSF9P41273 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.14■□□□□ 0.65
TNFSF9P41273 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TNFSF9P41273 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.14■□□□□ 0.65
TNFSF9P41273 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.14■□□□□ 0.65
TNFSF9P41273 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.14■□□□□ 0.65
TNFSF9P41273 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TNFSF9P41273 AC132938.5-201ENST00000624980 1813 ntBASIC19.14■□□□□ 0.65
TNFSF9P41273 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.14■□□□□ 0.65
TNFSF9P41273 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
TNFSF9P41273 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFSF9P41273 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFSF9P41273 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFSF9P41273 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFSF9P41273 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFSF9P41273 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFSF9P41273 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFSF9P41273 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFSF9P41273 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFSF9P41273 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.13■□□□□ 0.65
TNFSF9P41273 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TNFSF9P41273 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFSF9P41273 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFSF9P41273 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TNFSF9P41273 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFSF9P41273 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.13■□□□□ 0.65
TNFSF9P41273 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.13■□□□□ 0.65
TNFSF9P41273 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms