Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SOX11P35716 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SOX11P35716 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SOX11P35716 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SOX11P35716 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SOX11P35716 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SOX11P35716 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SOX11P35716 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.37■□□□□ 0.37
SOX11P35716 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.37■□□□□ 0.37
SOX11P35716 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SOX11P35716 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SOX11P35716 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SOX11P35716 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.37■□□□□ 0.37
SOX11P35716 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SOX11P35716 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SOX11P35716 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SOX11P35716 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.37■□□□□ 0.37
SOX11P35716 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SOX11P35716 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.37■□□□□ 0.37
SOX11P35716 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.37■□□□□ 0.37
SOX11P35716 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SOX11P35716 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SOX11P35716 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
SOX11P35716 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SOX11P35716 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SOX11P35716 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SOX11P35716 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SOX11P35716 AC141586.5-201ENST00000624546 2050 ntBASIC17.36■□□□□ 0.37
SOX11P35716 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SOX11P35716 AC036111.1-201ENST00000533973 1582 ntBASIC17.36■□□□□ 0.37
SOX11P35716 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.36■□□□□ 0.37
SOX11P35716 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SOX11P35716 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SOX11P35716 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SOX11P35716 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
SOX11P35716 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SOX11P35716 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SOX11P35716 PHGDH-209ENST00000641074 1780 ntBASIC17.36■□□□□ 0.37
SOX11P35716 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SOX11P35716 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SOX11P35716 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
SOX11P35716 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SOX11P35716 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SOX11P35716 MCCD1P1-208ENST00000445732 328 ntBASIC17.36■□□□□ 0.37
SOX11P35716 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.36■□□□□ 0.37
SOX11P35716 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.36■□□□□ 0.37
SOX11P35716 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.36■□□□□ 0.37
SOX11P35716 VENTXP5-201ENST00000523979 775 ntBASIC17.36■□□□□ 0.37
SOX11P35716 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.36■□□□□ 0.37
SOX11P35716 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SOX11P35716 ZNF444P1-201ENST00000559497 298 ntBASIC17.36■□□□□ 0.37
SOX11P35716 MIR3180-5-201ENST00000583743 153 ntBASIC17.36■□□□□ 0.37
SOX11P35716 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.36■□□□□ 0.37
SOX11P35716 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SOX11P35716 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.36■□□□□ 0.37
SOX11P35716 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SOX11P35716 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.36■□□□□ 0.37
SOX11P35716 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SOX11P35716 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.36■□□□□ 0.37
SOX11P35716 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.36■□□□□ 0.37
SOX11P35716 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.36■□□□□ 0.37
SOX11P35716 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
SOX11P35716 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SOX11P35716 LINC01311-201ENST00000565162 1445 ntBASIC17.36■□□□□ 0.37
SOX11P35716 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SOX11P35716 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SOX11P35716 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SOX11P35716 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SOX11P35716 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
SOX11P35716 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SOX11P35716 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SOX11P35716 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
SOX11P35716 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SOX11P35716 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.36■□□□□ 0.37
SOX11P35716 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX11P35716 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX11P35716 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.35■□□□□ 0.37
SOX11P35716 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX11P35716 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SOX11P35716 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX11P35716 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SOX11P35716 AC008894.3-201ENST00000624324 3103 ntBASIC17.35■□□□□ 0.37
SOX11P35716 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SOX11P35716 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SOX11P35716 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX11P35716 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.35■□□□□ 0.37
SOX11P35716 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX11P35716 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX11P35716 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SOX11P35716 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.35■□□□□ 0.37
SOX11P35716 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.35■□□□□ 0.37
SOX11P35716 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
SOX11P35716 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.35■□□□□ 0.37
SOX11P35716 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX11P35716 AC084018.2-201ENST00000613093 2607 ntBASIC17.35■□□□□ 0.37
SOX11P35716 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.35■□□□□ 0.37
SOX11P35716 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX11P35716 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.35■□□□□ 0.37
SOX11P35716 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX11P35716 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms