Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.43■□□□□ 0.7
KRT9P35527 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.43■□□□□ 0.7
KRT9P35527 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT9P35527 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
KRT9P35527 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT9P35527 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT9P35527 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT9P35527 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT9P35527 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.43■□□□□ 0.7
KRT9P35527 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.43■□□□□ 0.7
KRT9P35527 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.43■□□□□ 0.7
KRT9P35527 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KRT9P35527 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.42■□□□□ 0.7
KRT9P35527 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT9P35527 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.42■□□□□ 0.7
KRT9P35527 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT9P35527 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KRT9P35527 AC124067.4-201ENST00000519691 2379 ntBASIC19.42■□□□□ 0.7
KRT9P35527 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.42■□□□□ 0.7
KRT9P35527 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT9P35527 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.42■□□□□ 0.7
KRT9P35527 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
KRT9P35527 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KRT9P35527 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KRT9P35527 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.42■□□□□ 0.7
KRT9P35527 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.42■□□□□ 0.7
KRT9P35527 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
KRT9P35527 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
KRT9P35527 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
KRT9P35527 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
KRT9P35527 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KRT9P35527 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT9P35527 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KRT9P35527 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT9P35527 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
KRT9P35527 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
KRT9P35527 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT9P35527 AC073508.3-201ENST00000619697 1419 ntBASIC19.42■□□□□ 0.7
KRT9P35527 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
KRT9P35527 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.41■□□□□ 0.7
KRT9P35527 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KRT9P35527 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
KRT9P35527 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KRT9P35527 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.41■□□□□ 0.7
KRT9P35527 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.41■□□□□ 0.7
KRT9P35527 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT9P35527 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT9P35527 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT9P35527 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT9P35527 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KRT9P35527 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.41■□□□□ 0.7
KRT9P35527 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
KRT9P35527 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.41■□□□□ 0.7
KRT9P35527 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.41■□□□□ 0.7
KRT9P35527 AC139887.4-201ENST00000607877 719 ntBASIC19.41■□□□□ 0.7
KRT9P35527 AC011558.1-201ENST00000623459 338 ntBASIC19.41■□□□□ 0.7
KRT9P35527 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
KRT9P35527 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
KRT9P35527 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.41■□□□□ 0.7
KRT9P35527 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.41■□□□□ 0.7
KRT9P35527 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT9P35527 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.41■□□□□ 0.7
KRT9P35527 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT9P35527 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT9P35527 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.41■□□□□ 0.7
KRT9P35527 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
KRT9P35527 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.41■□□□□ 0.7
KRT9P35527 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT9P35527 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.41■□□□□ 0.7
KRT9P35527 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.41■□□□□ 0.7
KRT9P35527 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
KRT9P35527 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT9P35527 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRT9P35527 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
KRT9P35527 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.4■□□□□ 0.7
KRT9P35527 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT9P35527 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
KRT9P35527 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT9P35527 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
KRT9P35527 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
KRT9P35527 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT9P35527 AC009949.1-201ENST00000623048 1830 ntBASIC19.4■□□□□ 0.7
KRT9P35527 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT9P35527 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT9P35527 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT9P35527 PVRIG2P-201ENST00000435460 978 ntBASIC19.4■□□□□ 0.7
KRT9P35527 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
KRT9P35527 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.4■□□□□ 0.7
KRT9P35527 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.4■□□□□ 0.7
KRT9P35527 AL441883.1-201ENST00000566170 1045 ntBASIC19.4■□□□□ 0.7
KRT9P35527 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.4■□□□□ 0.7
KRT9P35527 AC008687.5-201ENST00000593746 558 ntBASIC19.4■□□□□ 0.7
KRT9P35527 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT9P35527 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRT9P35527 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.39■□□□□ 0.7
KRT9P35527 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
KRT9P35527 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.39■□□□□ 0.7
KRT9P35527 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
KRT9P35527 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
KRT9P35527 REXO1L11P-201ENST00000620964 1927 ntBASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms