Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.27■□□□□ 0.04
CD40P25942 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CD40P25942 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CD40P25942 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CD40P25942 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.27■□□□□ 0.04
CD40P25942 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CD40P25942 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.27■□□□□ 0.04
CD40P25942 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CD40P25942 SIRPAP1-201ENST00000448467 1770 ntBASIC15.27■□□□□ 0.04
CD40P25942 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC15.27■□□□□ 0.04
CD40P25942 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CD40P25942 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CD40P25942 PKD1P1-201ENST00000458669 6805 ntBASIC15.27■□□□□ 0.04
CD40P25942 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CD40P25942 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CD40P25942 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CD40P25942 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CD40P25942 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CD40P25942 AL022342.1-201ENST00000400363 863 ntBASIC15.27■□□□□ 0.04
CD40P25942 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.27■□□□□ 0.04
CD40P25942 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.27■□□□□ 0.04
CD40P25942 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CD40P25942 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.27■□□□□ 0.04
CD40P25942 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CD40P25942 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.27■□□□□ 0.04
CD40P25942 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
CD40P25942 NKAPP1-205ENST00000585790 367 ntBASIC15.27■□□□□ 0.04
CD40P25942 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CD40P25942 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.27■□□□□ 0.04
CD40P25942 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CD40P25942 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CD40P25942 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CD40P25942 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CD40P25942 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.27■□□□□ 0.03
CD40P25942 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CD40P25942 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.27■□□□□ 0.03
CD40P25942 KRT18P55-202ENST00000578578 1546 ntBASIC15.27■□□□□ 0.03
CD40P25942 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CD40P25942 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
CD40P25942 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CD40P25942 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.27■□□□□ 0.03
CD40P25942 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD40P25942 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD40P25942 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD40P25942 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD40P25942 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
CD40P25942 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD40P25942 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD40P25942 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD40P25942 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD40P25942 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CD40P25942 AC079776.2-201ENST00000641154 1609 ntBASIC15.26■□□□□ 0.03
CD40P25942 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CD40P25942 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD40P25942 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD40P25942 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.26■□□□□ 0.03
CD40P25942 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CD40P25942 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.26■□□□□ 0.03
CD40P25942 AL590627.1-203ENST00000421194 1026 ntBASIC15.26■□□□□ 0.03
CD40P25942 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CD40P25942 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CD40P25942 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.26■□□□□ 0.03
CD40P25942 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.26■□□□□ 0.03
CD40P25942 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.26■□□□□ 0.03
CD40P25942 AC120114.3-201ENST00000611923 658 ntBASIC15.26■□□□□ 0.03
CD40P25942 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CD40P25942 BX640515.1-201ENST00000617215 977 ntBASIC15.26■□□□□ 0.03
CD40P25942 FAM215A-202ENST00000632077 792 ntBASIC15.26■□□□□ 0.03
CD40P25942 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.26■□□□□ 0.03
CD40P25942 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD40P25942 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CD40P25942 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD40P25942 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD40P25942 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD40P25942 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.26■□□□□ 0.03
CD40P25942 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD40P25942 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
CD40P25942 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CD40P25942 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CD40P25942 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CD40P25942 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD40P25942 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD40P25942 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.25■□□□□ 0.03
CD40P25942 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD40P25942 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD40P25942 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
CD40P25942 ABALON-201ENST00000629058 1903 ntBASIC15.25■□□□□ 0.03
CD40P25942 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD40P25942 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD40P25942 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
CD40P25942 AC138028.4-201ENST00000564984 1845 ntBASIC15.25■□□□□ 0.03
CD40P25942 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD40P25942 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.25■□□□□ 0.03
CD40P25942 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CD40P25942 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.25■□□□□ 0.03
CD40P25942 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CD40P25942 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.25■□□□□ 0.03
CD40P25942 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CD40P25942 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CD40P25942 RPS2P1-201ENST00000434010 821 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms