Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 HARS-201ENST00000307633 1780 ntTSL 2 BASIC21.13■□□□□ 0.97
NCLP19338 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCLP19338 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.12■□□□□ 0.97
NCLP19338 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
NCLP19338 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC21.12■□□□□ 0.97
NCLP19338 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCLP19338 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCLP19338 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCLP19338 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC21.12■□□□□ 0.97
NCLP19338 KRT18P22-201ENST00000402024 1347 ntBASIC21.12■□□□□ 0.97
NCLP19338 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCLP19338 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC21.12■□□□□ 0.97
NCLP19338 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
NCLP19338 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NCLP19338 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCLP19338 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC21.12■□□□□ 0.97
NCLP19338 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
NCLP19338 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.12■□□□□ 0.97
NCLP19338 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCLP19338 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.12■□□□□ 0.97
NCLP19338 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
NCLP19338 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.12■□□□□ 0.97
NCLP19338 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
NCLP19338 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.12■□□□□ 0.97
NCLP19338 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.12■□□□□ 0.97
NCLP19338 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.12■□□□□ 0.97
NCLP19338 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NCLP19338 AC010331.1-201ENST00000611423 582 ntBASIC21.12■□□□□ 0.97
NCLP19338 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCLP19338 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NCLP19338 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCLP19338 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCLP19338 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCLP19338 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC21.12■□□□□ 0.97
NCLP19338 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
NCLP19338 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCLP19338 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCLP19338 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCLP19338 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NCLP19338 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC21.12■□□□□ 0.97
NCLP19338 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC21.12■□□□□ 0.97
NCLP19338 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NCLP19338 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCLP19338 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCLP19338 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCLP19338 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCLP19338 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCLP19338 AL023806.1-201ENST00000603994 1649 ntBASIC21.11■□□□□ 0.97
NCLP19338 AC096733.2-201ENST00000609937 1394 ntBASIC21.11■□□□□ 0.97
NCLP19338 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCLP19338 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCLP19338 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCLP19338 UROS-202ENST00000368778 1556 ntTSL 2 BASIC21.11■□□□□ 0.97
NCLP19338 AC036111.1-201ENST00000533973 1582 ntBASIC21.11■□□□□ 0.97
NCLP19338 AC006116.8-202ENST00000587620 1550 ntBASIC21.11■□□□□ 0.97
NCLP19338 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
NCLP19338 SDHAP2-201ENST00000455183 2001 ntBASIC21.11■□□□□ 0.97
NCLP19338 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCLP19338 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCLP19338 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCLP19338 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NCLP19338 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCLP19338 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
NCLP19338 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCLP19338 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.11■□□□□ 0.97
NCLP19338 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCLP19338 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.11■□□□□ 0.97
NCLP19338 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.11■□□□□ 0.97
NCLP19338 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
NCLP19338 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCLP19338 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC21.11■□□□□ 0.97
NCLP19338 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCLP19338 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
NCLP19338 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCLP19338 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC21.11■□□□□ 0.97
NCLP19338 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
NCLP19338 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCLP19338 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC21.11■□□□□ 0.97
NCLP19338 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCLP19338 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCLP19338 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
NCLP19338 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
NCLP19338 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NCLP19338 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NCLP19338 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NCLP19338 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NCLP19338 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NCLP19338 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
NCLP19338 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NCLP19338 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NCLP19338 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NCLP19338 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
NCLP19338 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NCLP19338 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NCLP19338 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
NCLP19338 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NCLP19338 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NCLP19338 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.1■□□□□ 0.97
NCLP19338 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.1■□□□□ 0.97
NCLP19338 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms