Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.77■□□□□ 0.6
PTPN1P18031 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.77■□□□□ 0.6
PTPN1P18031 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.77■□□□□ 0.6
PTPN1P18031 MTDHP3-201ENST00000594186 672 ntBASIC18.77■□□□□ 0.6
PTPN1P18031 AC008608.2-201ENST00000606089 416 ntBASIC18.77■□□□□ 0.6
PTPN1P18031 AL355877.3-201ENST00000622820 899 ntBASIC18.77■□□□□ 0.6
PTPN1P18031 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PTPN1P18031 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
PTPN1P18031 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN1P18031 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN1P18031 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN1P18031 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN1P18031 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PTPN1P18031 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PTPN1P18031 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
PTPN1P18031 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN1P18031 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN1P18031 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN1P18031 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN1P18031 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN1P18031 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN1P18031 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN1P18031 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.76■□□□□ 0.59
PTPN1P18031 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN1P18031 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.76■□□□□ 0.59
PTPN1P18031 AC026396.1-201ENST00000419388 421 ntBASIC18.76■□□□□ 0.59
PTPN1P18031 SLC25A6P5-201ENST00000435663 894 ntBASIC18.76■□□□□ 0.59
PTPN1P18031 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN1P18031 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.76■□□□□ 0.59
PTPN1P18031 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.76■□□□□ 0.59
PTPN1P18031 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.76■□□□□ 0.59
PTPN1P18031 AL160237.2-201ENST00000556165 472 ntBASIC18.76■□□□□ 0.59
PTPN1P18031 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.76■□□□□ 0.59
PTPN1P18031 AD001527.2-201ENST00000622994 785 ntBASIC18.76■□□□□ 0.59
PTPN1P18031 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.76■□□□□ 0.59
PTPN1P18031 AP000867.4-201ENST00000641616 219 ntBASIC18.76■□□□□ 0.59
PTPN1P18031 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.76■□□□□ 0.59
PTPN1P18031 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN1P18031 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.76■□□□□ 0.59
PTPN1P18031 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PTPN1P18031 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN1P18031 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN1P18031 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.76■□□□□ 0.59
PTPN1P18031 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.76■□□□□ 0.59
PTPN1P18031 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN1P18031 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PTPN1P18031 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
PTPN1P18031 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PTPN1P18031 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN1P18031 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN1P18031 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN1P18031 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN1P18031 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
PTPN1P18031 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
PTPN1P18031 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN1P18031 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN1P18031 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN1P18031 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PTPN1P18031 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.75■□□□□ 0.59
PTPN1P18031 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.75■□□□□ 0.59
PTPN1P18031 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PTPN1P18031 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN1P18031 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PTPN1P18031 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.75■□□□□ 0.59
PTPN1P18031 NOC2LP1-202ENST00000452600 2235 ntBASIC18.75■□□□□ 0.59
PTPN1P18031 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.75■□□□□ 0.59
PTPN1P18031 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
PTPN1P18031 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN1P18031 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
PTPN1P18031 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.74■□□□□ 0.59
PTPN1P18031 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.74■□□□□ 0.59
PTPN1P18031 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN1P18031 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.74■□□□□ 0.59
PTPN1P18031 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN1P18031 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN1P18031 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN1P18031 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.74■□□□□ 0.59
PTPN1P18031 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN1P18031 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN1P18031 AL049757.1-201ENST00000616842 1596 ntBASIC18.74■□□□□ 0.59
PTPN1P18031 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN1P18031 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN1P18031 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN1P18031 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
PTPN1P18031 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
PTPN1P18031 FGFR3P6-201ENST00000457012 610 ntBASIC18.74■□□□□ 0.59
PTPN1P18031 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.74■□□□□ 0.59
PTPN1P18031 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.74■□□□□ 0.59
PTPN1P18031 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.74■□□□□ 0.59
PTPN1P18031 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN1P18031 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.74■□□□□ 0.59
PTPN1P18031 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.74■□□□□ 0.59
PTPN1P18031 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.73■□□□□ 0.59
PTPN1P18031 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.73■□□□□ 0.59
PTPN1P18031 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.73■□□□□ 0.59
PTPN1P18031 BCL2-203ENST00000589955 5011 ntBASIC18.73■□□□□ 0.59
PTPN1P18031 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN1P18031 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PTPN1P18031 PMPCAP1-201ENST00000508114 1576 ntBASIC18.73■□□□□ 0.59
PTPN1P18031 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms