Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AL139384.1-201ENST00000612143 3047 ntBASIC16.78■□□□□ 0.28
NCK1P16333 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NCK1P16333 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.78■□□□□ 0.28
NCK1P16333 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
NCK1P16333 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCK1P16333 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.77■□□□□ 0.28
NCK1P16333 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NCK1P16333 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NCK1P16333 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCK1P16333 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NCK1P16333 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCK1P16333 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.77■□□□□ 0.28
NCK1P16333 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCK1P16333 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCK1P16333 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.77■□□□□ 0.28
NCK1P16333 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
NCK1P16333 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
NCK1P16333 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NCK1P16333 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
NCK1P16333 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.77■□□□□ 0.28
NCK1P16333 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.77■□□□□ 0.28
NCK1P16333 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.77■□□□□ 0.28
NCK1P16333 AL353719.1-201ENST00000566847 864 ntBASIC16.77■□□□□ 0.28
NCK1P16333 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCK1P16333 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
NCK1P16333 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
NCK1P16333 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NCK1P16333 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NCK1P16333 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
NCK1P16333 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NCK1P16333 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.77■□□□□ 0.27
NCK1P16333 AL135905.2-201ENST00000584934 1404 ntBASIC16.77■□□□□ 0.27
NCK1P16333 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
NCK1P16333 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NCK1P16333 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NCK1P16333 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NCK1P16333 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
NCK1P16333 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
NCK1P16333 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
NCK1P16333 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NCK1P16333 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
NCK1P16333 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
NCK1P16333 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.76■□□□□ 0.27
NCK1P16333 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCK1P16333 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCK1P16333 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCK1P16333 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCK1P16333 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
NCK1P16333 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
NCK1P16333 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.76■□□□□ 0.27
NCK1P16333 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NCK1P16333 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCK1P16333 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCK1P16333 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NCK1P16333 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NCK1P16333 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
NCK1P16333 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCK1P16333 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCK1P16333 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.76■□□□□ 0.27
NCK1P16333 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.76■□□□□ 0.27
NCK1P16333 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NCK1P16333 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.76■□□□□ 0.27
NCK1P16333 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.76■□□□□ 0.27
NCK1P16333 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.76■□□□□ 0.27
NCK1P16333 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCK1P16333 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.76■□□□□ 0.27
NCK1P16333 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.76■□□□□ 0.27
NCK1P16333 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.76■□□□□ 0.27
NCK1P16333 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.76■□□□□ 0.27
NCK1P16333 LINC01451-201ENST00000623792 534 ntBASIC16.76■□□□□ 0.27
NCK1P16333 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.76■□□□□ 0.27
NCK1P16333 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.76■□□□□ 0.27
NCK1P16333 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCK1P16333 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCK1P16333 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.76■□□□□ 0.27
NCK1P16333 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
NCK1P16333 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCK1P16333 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
NCK1P16333 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.76■□□□□ 0.27
NCK1P16333 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.76■□□□□ 0.27
NCK1P16333 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
NCK1P16333 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.76■□□□□ 0.27
NCK1P16333 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCK1P16333 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.76■□□□□ 0.27
NCK1P16333 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCK1P16333 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCK1P16333 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
NCK1P16333 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.75■□□□□ 0.27
NCK1P16333 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCK1P16333 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
NCK1P16333 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCK1P16333 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NCK1P16333 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.75■□□□□ 0.27
NCK1P16333 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.75■□□□□ 0.27
NCK1P16333 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.75■□□□□ 0.27
NCK1P16333 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.75■□□□□ 0.27
NCK1P16333 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCK1P16333 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
NCK1P16333 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
NCK1P16333 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms