Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PDGFRAP16234 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFRAP16234 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFRAP16234 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.62■□□□□ 0.57
PDGFRAP16234 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PDGFRAP16234 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFRAP16234 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.61■□□□□ 0.57
PDGFRAP16234 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFRAP16234 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFRAP16234 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFRAP16234 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFRAP16234 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFRAP16234 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.61■□□□□ 0.57
PDGFRAP16234 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFRAP16234 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.61■□□□□ 0.57
PDGFRAP16234 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFRAP16234 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFRAP16234 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFRAP16234 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFRAP16234 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.61■□□□□ 0.57
PDGFRAP16234 AC096633.1-201ENST00000422446 749 ntBASIC18.61■□□□□ 0.57
PDGFRAP16234 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFRAP16234 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.61■□□□□ 0.57
PDGFRAP16234 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.61■□□□□ 0.57
PDGFRAP16234 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.61■□□□□ 0.57
PDGFRAP16234 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFRAP16234 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
PDGFRAP16234 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PDGFRAP16234 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFRAP16234 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PDGFRAP16234 REXO1L11P-201ENST00000620964 1927 ntBASIC18.61■□□□□ 0.57
PDGFRAP16234 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFRAP16234 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.6■□□□□ 0.57
PDGFRAP16234 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFRAP16234 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFRAP16234 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.6■□□□□ 0.57
PDGFRAP16234 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.6■□□□□ 0.57
PDGFRAP16234 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFRAP16234 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFRAP16234 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFRAP16234 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
PDGFRAP16234 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFRAP16234 AC097374.2-201ENST00000618617 1306 ntBASIC18.6■□□□□ 0.57
PDGFRAP16234 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFRAP16234 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
PDGFRAP16234 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFRAP16234 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PDGFRAP16234 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFRAP16234 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.6■□□□□ 0.57
PDGFRAP16234 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.6■□□□□ 0.57
PDGFRAP16234 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.6■□□□□ 0.57
PDGFRAP16234 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFRAP16234 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFRAP16234 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.6■□□□□ 0.57
PDGFRAP16234 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.6■□□□□ 0.57
PDGFRAP16234 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFRAP16234 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFRAP16234 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFRAP16234 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
PDGFRAP16234 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFRAP16234 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PDGFRAP16234 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.59■□□□□ 0.57
PDGFRAP16234 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDGFRAP16234 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.59■□□□□ 0.57
PDGFRAP16234 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDGFRAP16234 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.59■□□□□ 0.57
PDGFRAP16234 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDGFRAP16234 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PDGFRAP16234 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDGFRAP16234 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.59■□□□□ 0.57
PDGFRAP16234 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.59■□□□□ 0.57
PDGFRAP16234 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PDGFRAP16234 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.59■□□□□ 0.57
PDGFRAP16234 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.59■□□□□ 0.57
PDGFRAP16234 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PDGFRAP16234 LINC00265-3P-201ENST00000447588 903 ntBASIC18.59■□□□□ 0.57
PDGFRAP16234 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.59■□□□□ 0.57
PDGFRAP16234 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.59■□□□□ 0.57
PDGFRAP16234 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.59■□□□□ 0.57
PDGFRAP16234 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.59■□□□□ 0.57
PDGFRAP16234 TPSP2-201ENST00000561760 610 ntBASIC18.59■□□□□ 0.57
PDGFRAP16234 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.59■□□□□ 0.57
PDGFRAP16234 CLEC4GP1-201ENST00000596555 870 ntBASIC18.59■□□□□ 0.57
PDGFRAP16234 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDGFRAP16234 LETM1P2-201ENST00000597330 2178 ntBASIC18.59■□□□□ 0.57
PDGFRAP16234 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.59■□□□□ 0.57
PDGFRAP16234 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDGFRAP16234 BX276092.7-203ENST00000637198 1536 ntBASIC18.59■□□□□ 0.57
PDGFRAP16234 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDGFRAP16234 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PDGFRAP16234 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
PDGFRAP16234 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PDGFRAP16234 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDGFRAP16234 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDGFRAP16234 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDGFRAP16234 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PDGFRAP16234 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDGFRAP16234 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
PDGFRAP16234 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.58■□□□□ 0.57
PDGFRAP16234 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 199.2 ms