Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 SPDYE9P-201ENST00000570642 692 ntBASIC21.49■■□□□ 1.03
COL11A2P13942 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC21.49■■□□□ 1.03
COL11A2P13942 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL11A2P13942 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL11A2P13942 SPDYE10P-202ENST00000612005 668 ntBASIC21.49■■□□□ 1.03
COL11A2P13942 SPDYE8P-202ENST00000612377 668 ntBASIC21.49■■□□□ 1.03
COL11A2P13942 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL11A2P13942 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.48■■□□□ 1.03
COL11A2P13942 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL11A2P13942 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC21.48■■□□□ 1.03
COL11A2P13942 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL11A2P13942 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL11A2P13942 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL11A2P13942 AC236430.1-201ENST00000402231 743 ntBASIC21.48■■□□□ 1.03
COL11A2P13942 AC092474.2-201ENST00000424288 719 ntBASIC21.48■■□□□ 1.03
COL11A2P13942 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC21.48■■□□□ 1.03
COL11A2P13942 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC21.48■■□□□ 1.03
COL11A2P13942 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL11A2P13942 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC21.48■■□□□ 1.03
COL11A2P13942 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL11A2P13942 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC21.48■■□□□ 1.03
COL11A2P13942 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL11A2P13942 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC21.48■■□□□ 1.03
COL11A2P13942 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL11A2P13942 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL11A2P13942 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC21.47■■□□□ 1.03
COL11A2P13942 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.47■■□□□ 1.03
COL11A2P13942 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC21.47■■□□□ 1.03
COL11A2P13942 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC21.47■■□□□ 1.03
COL11A2P13942 AC140658.5-201ENST00000438532 169 ntBASIC21.47■■□□□ 1.03
COL11A2P13942 UGT1A2P-201ENST00000454886 866 ntBASIC21.47■■□□□ 1.03
COL11A2P13942 IGHV3-52-201ENST00000519770 353 ntBASIC21.47■■□□□ 1.03
COL11A2P13942 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
COL11A2P13942 DUX4L27-201ENST00000554796 1261 ntBASIC21.47■■□□□ 1.03
COL11A2P13942 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC21.47■■□□□ 1.03
COL11A2P13942 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.47■■□□□ 1.03
COL11A2P13942 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
COL11A2P13942 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COL11A2P13942 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.47■■□□□ 1.03
COL11A2P13942 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COL11A2P13942 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL11A2P13942 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
COL11A2P13942 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL11A2P13942 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL11A2P13942 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL11A2P13942 BAD-202ENST00000394531 631 ntTSL 3 BASIC21.46■■□□□ 1.03
COL11A2P13942 HLA-DRB6-201ENST00000411500 1235 ntBASIC21.46■■□□□ 1.03
COL11A2P13942 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL11A2P13942 THTPA-204ENST00000554970 569 ntTSL 4 BASIC21.46■■□□□ 1.03
COL11A2P13942 THTPA-206ENST00000556015 535 ntTSL 3 BASIC21.46■■□□□ 1.03
COL11A2P13942 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
COL11A2P13942 HFE2-206ENST00000634927 506 ntTSL 4 BASIC21.46■■□□□ 1.03
COL11A2P13942 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL11A2P13942 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL11A2P13942 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL11A2P13942 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC21.46■■□□□ 1.03
COL11A2P13942 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL11A2P13942 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC21.46■■□□□ 1.03
COL11A2P13942 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC21.46■■□□□ 1.03
COL11A2P13942 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.46■■□□□ 1.03
COL11A2P13942 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC21.46■■□□□ 1.03
COL11A2P13942 NABP1-203ENST00000409510 843 ntTSL 5 BASIC21.46■■□□□ 1.03
COL11A2P13942 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL11A2P13942 AC025678.2-201ENST00000562061 970 ntBASIC21.46■■□□□ 1.03
COL11A2P13942 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC21.46■■□□□ 1.03
COL11A2P13942 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC21.46■■□□□ 1.03
COL11A2P13942 AC012645.4-201ENST00000610691 1061 ntBASIC21.46■■□□□ 1.03
COL11A2P13942 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
COL11A2P13942 AP001059.3-201ENST00000619053 235 ntBASIC21.46■■□□□ 1.03
COL11A2P13942 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL11A2P13942 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL11A2P13942 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.46■■□□□ 1.03
COL11A2P13942 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL11A2P13942 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL11A2P13942 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL11A2P13942 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.45■■□□□ 1.02
COL11A2P13942 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL11A2P13942 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COL11A2P13942 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL11A2P13942 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.45■■□□□ 1.02
COL11A2P13942 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.45■■□□□ 1.02
COL11A2P13942 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.45■■□□□ 1.02
COL11A2P13942 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
COL11A2P13942 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL11A2P13942 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL11A2P13942 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COL11A2P13942 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL11A2P13942 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COL11A2P13942 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC21.45■■□□□ 1.02
COL11A2P13942 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC21.45■■□□□ 1.02
COL11A2P13942 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL11A2P13942 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL11A2P13942 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COL11A2P13942 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COL11A2P13942 PI4KAP1-204ENST00000612579 1703 ntBASIC21.45■■□□□ 1.02
COL11A2P13942 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COL11A2P13942 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL11A2P13942 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL11A2P13942 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.45■■□□□ 1.02
COL11A2P13942 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms