Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SCG2P13521 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SCG2P13521 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.39■□□□□ 0.86
SCG2P13521 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SCG2P13521 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
SCG2P13521 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SCG2P13521 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.39■□□□□ 0.86
SCG2P13521 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SCG2P13521 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SCG2P13521 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCG2P13521 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCG2P13521 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCG2P13521 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCG2P13521 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
SCG2P13521 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.39■□□□□ 0.85
SCG2P13521 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.39■□□□□ 0.85
SCG2P13521 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.39■□□□□ 0.85
SCG2P13521 PRELID1P1-202ENST00000567272 903 ntBASIC20.39■□□□□ 0.85
SCG2P13521 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.39■□□□□ 0.85
SCG2P13521 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.39■□□□□ 0.85
SCG2P13521 LINC01451-201ENST00000623792 534 ntBASIC20.39■□□□□ 0.85
SCG2P13521 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SCG2P13521 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCG2P13521 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCG2P13521 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCG2P13521 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCG2P13521 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCG2P13521 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.39■□□□□ 0.85
SCG2P13521 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.39■□□□□ 0.85
SCG2P13521 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SCG2P13521 AC133963.1-201ENST00000504166 1679 ntBASIC20.38■□□□□ 0.85
SCG2P13521 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SCG2P13521 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCG2P13521 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.38■□□□□ 0.85
SCG2P13521 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCG2P13521 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.38■□□□□ 0.85
SCG2P13521 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SCG2P13521 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.38■□□□□ 0.85
SCG2P13521 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.38■□□□□ 0.85
SCG2P13521 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCG2P13521 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.38■□□□□ 0.85
SCG2P13521 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.38■□□□□ 0.85
SCG2P13521 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCG2P13521 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCG2P13521 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SCG2P13521 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCG2P13521 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCG2P13521 AC019129.2-201ENST00000609837 1235 ntBASIC20.38■□□□□ 0.85
SCG2P13521 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.38■□□□□ 0.85
SCG2P13521 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.38■□□□□ 0.85
SCG2P13521 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SCG2P13521 SIRPAP1-201ENST00000448467 1770 ntBASIC20.38■□□□□ 0.85
SCG2P13521 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCG2P13521 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.38■□□□□ 0.85
SCG2P13521 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCG2P13521 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SCG2P13521 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SCG2P13521 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.38■□□□□ 0.85
SCG2P13521 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.38■□□□□ 0.85
SCG2P13521 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SCG2P13521 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SCG2P13521 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.37■□□□□ 0.85
SCG2P13521 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCG2P13521 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
SCG2P13521 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCG2P13521 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
SCG2P13521 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCG2P13521 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SCG2P13521 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SCG2P13521 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.37■□□□□ 0.85
SCG2P13521 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.37■□□□□ 0.85
SCG2P13521 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.37■□□□□ 0.85
SCG2P13521 KRT16P4-201ENST00000453883 522 ntBASIC20.37■□□□□ 0.85
SCG2P13521 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.37■□□□□ 0.85
SCG2P13521 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.37■□□□□ 0.85
SCG2P13521 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.37■□□□□ 0.85
SCG2P13521 MIR5100-201ENST00000579544 119 ntBASIC20.37■□□□□ 0.85
SCG2P13521 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SCG2P13521 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.37■□□□□ 0.85
SCG2P13521 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SCG2P13521 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.37■□□□□ 0.85
SCG2P13521 HLA-J-201ENST00000462773 1622 ntBASIC20.37■□□□□ 0.85
SCG2P13521 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.37■□□□□ 0.85
SCG2P13521 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCG2P13521 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCG2P13521 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCG2P13521 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
SCG2P13521 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SCG2P13521 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.36■□□□□ 0.85
SCG2P13521 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.36■□□□□ 0.85
SCG2P13521 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.36■□□□□ 0.85
SCG2P13521 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCG2P13521 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.36■□□□□ 0.85
SCG2P13521 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
SCG2P13521 TSPY19P-201ENST00000418461 509 ntBASIC20.36■□□□□ 0.85
SCG2P13521 AC103564.2-201ENST00000432853 1299 ntBASIC20.36■□□□□ 0.85
SCG2P13521 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.36■□□□□ 0.85
SCG2P13521 TSPY18P-201ENST00000441642 509 ntBASIC20.36■□□□□ 0.85
SCG2P13521 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCG2P13521 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms