Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14.46□□□□□ -0.09
DEFA4P12838 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
DEFA4P12838 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
DEFA4P12838 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC14.46□□□□□ -0.1
DEFA4P12838 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
DEFA4P12838 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
DEFA4P12838 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
DEFA4P12838 AC011676.5-201ENST00000624864 2660 ntBASIC14.46□□□□□ -0.1
DEFA4P12838 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
DEFA4P12838 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
DEFA4P12838 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DEFA4P12838 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
DEFA4P12838 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DEFA4P12838 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
DEFA4P12838 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
DEFA4P12838 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
DEFA4P12838 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
DEFA4P12838 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DEFA4P12838 CYP2D8P-201ENST00000433633 1490 ntBASIC14.45□□□□□ -0.1
DEFA4P12838 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
DEFA4P12838 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DEFA4P12838 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DEFA4P12838 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DEFA4P12838 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
DEFA4P12838 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.45□□□□□ -0.1
DEFA4P12838 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DEFA4P12838 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
DEFA4P12838 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DEFA4P12838 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DEFA4P12838 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
DEFA4P12838 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC14.45□□□□□ -0.1
DEFA4P12838 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DEFA4P12838 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DEFA4P12838 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DEFA4P12838 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DEFA4P12838 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC14.45□□□□□ -0.1
DEFA4P12838 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DEFA4P12838 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DEFA4P12838 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
DEFA4P12838 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.45□□□□□ -0.1
DEFA4P12838 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
DEFA4P12838 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC14.45□□□□□ -0.1
DEFA4P12838 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
DEFA4P12838 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
DEFA4P12838 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
DEFA4P12838 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
DEFA4P12838 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.45□□□□□ -0.1
DEFA4P12838 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.45□□□□□ -0.1
DEFA4P12838 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
DEFA4P12838 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC14.45□□□□□ -0.1
DEFA4P12838 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DEFA4P12838 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DEFA4P12838 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DEFA4P12838 FLJ13224-201ENST00000313737 1514 ntBASIC14.45□□□□□ -0.1
DEFA4P12838 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
DEFA4P12838 ASL-204ENST00000395331 1538 ntTSL 5 BASIC14.45□□□□□ -0.1
DEFA4P12838 LINC01568-207ENST00000641790 1380 ntBASIC14.45□□□□□ -0.1
DEFA4P12838 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
DEFA4P12838 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.45□□□□□ -0.1
DEFA4P12838 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.45□□□□□ -0.1
DEFA4P12838 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DEFA4P12838 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
DEFA4P12838 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
DEFA4P12838 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DEFA4P12838 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.44□□□□□ -0.1
DEFA4P12838 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
DEFA4P12838 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
DEFA4P12838 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DEFA4P12838 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DEFA4P12838 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DEFA4P12838 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
DEFA4P12838 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14.44□□□□□ -0.1
DEFA4P12838 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC14.44□□□□□ -0.1
DEFA4P12838 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DEFA4P12838 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
DEFA4P12838 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
DEFA4P12838 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.44□□□□□ -0.1
DEFA4P12838 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
DEFA4P12838 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DEFA4P12838 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.44□□□□□ -0.1
DEFA4P12838 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DEFA4P12838 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.44□□□□□ -0.1
DEFA4P12838 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.44□□□□□ -0.1
DEFA4P12838 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.44□□□□□ -0.1
DEFA4P12838 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DEFA4P12838 ILF2-202ENST00000368681 726 ntTSL 2 BASIC14.44□□□□□ -0.1
DEFA4P12838 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.44□□□□□ -0.1
DEFA4P12838 AP000523.1-201ENST00000398242 1049 ntBASIC14.44□□□□□ -0.1
DEFA4P12838 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
DEFA4P12838 HMGA1P5-201ENST00000412453 271 ntBASIC14.44□□□□□ -0.1
DEFA4P12838 TSPY15P-201ENST00000457163 923 ntBASIC14.44□□□□□ -0.1
DEFA4P12838 ECEL1P2-202ENST00000465689 757 ntBASIC14.44□□□□□ -0.1
DEFA4P12838 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC14.44□□□□□ -0.1
DEFA4P12838 AC104390.1-201ENST00000555663 520 ntBASIC14.44□□□□□ -0.1
DEFA4P12838 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.44□□□□□ -0.1
DEFA4P12838 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
DEFA4P12838 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
DEFA4P12838 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
DEFA4P12838 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
DEFA4P12838 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms