Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
BMP3P12645 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.4■□□□□ 0.86
BMP3P12645 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
BMP3P12645 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
BMP3P12645 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.4■□□□□ 0.86
BMP3P12645 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
BMP3P12645 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.4■□□□□ 0.86
BMP3P12645 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.4■□□□□ 0.86
BMP3P12645 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.4■□□□□ 0.86
BMP3P12645 IGHV3-52-201ENST00000519770 353 ntBASIC20.4■□□□□ 0.86
BMP3P12645 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.4■□□□□ 0.86
BMP3P12645 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
BMP3P12645 STK25P1-201ENST00000585406 838 ntBASIC20.4■□□□□ 0.86
BMP3P12645 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.4■□□□□ 0.86
BMP3P12645 AC023511.2-201ENST00000618803 211 ntBASIC20.4■□□□□ 0.86
BMP3P12645 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
BMP3P12645 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
BMP3P12645 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.39■□□□□ 0.86
BMP3P12645 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
BMP3P12645 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.39■□□□□ 0.86
BMP3P12645 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.39■□□□□ 0.86
BMP3P12645 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
BMP3P12645 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
BMP3P12645 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.39■□□□□ 0.85
BMP3P12645 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BMP3P12645 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
BMP3P12645 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
BMP3P12645 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
BMP3P12645 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.39■□□□□ 0.85
BMP3P12645 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
BMP3P12645 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
BMP3P12645 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BMP3P12645 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.39■□□□□ 0.85
BMP3P12645 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BMP3P12645 KRT18P27-201ENST00000427733 1299 ntBASIC20.39■□□□□ 0.85
BMP3P12645 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.39■□□□□ 0.85
BMP3P12645 RNA5SP415-201ENST00000517246 115 ntBASIC20.39■□□□□ 0.85
BMP3P12645 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
BMP3P12645 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.39■□□□□ 0.85
BMP3P12645 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.39■□□□□ 0.85
BMP3P12645 AC006557.2-201ENST00000592985 1240 ntBASIC20.39■□□□□ 0.85
BMP3P12645 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
BMP3P12645 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
BMP3P12645 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BMP3P12645 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
BMP3P12645 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
BMP3P12645 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
BMP3P12645 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BMP3P12645 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BMP3P12645 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.38■□□□□ 0.85
BMP3P12645 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BMP3P12645 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BMP3P12645 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.38■□□□□ 0.85
BMP3P12645 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
BMP3P12645 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.38■□□□□ 0.85
BMP3P12645 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BMP3P12645 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BMP3P12645 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BMP3P12645 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BMP3P12645 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BMP3P12645 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
BMP3P12645 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.38■□□□□ 0.85
BMP3P12645 SIGLEC30P-201ENST00000455569 941 ntBASIC20.38■□□□□ 0.85
BMP3P12645 AC002558.1-201ENST00000488906 803 ntBASIC20.38■□□□□ 0.85
BMP3P12645 POLD2P1-201ENST00000511220 997 ntBASIC20.38■□□□□ 0.85
BMP3P12645 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.38■□□□□ 0.85
BMP3P12645 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
BMP3P12645 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.38■□□□□ 0.85
BMP3P12645 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.38■□□□□ 0.85
BMP3P12645 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.38■□□□□ 0.85
BMP3P12645 AL589182.2-201ENST00000619332 1049 ntBASIC20.38■□□□□ 0.85
BMP3P12645 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
BMP3P12645 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BMP3P12645 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BMP3P12645 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BMP3P12645 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.38■□□□□ 0.85
BMP3P12645 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.38■□□□□ 0.85
BMP3P12645 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
BMP3P12645 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BMP3P12645 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BMP3P12645 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BMP3P12645 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.38■□□□□ 0.85
BMP3P12645 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
BMP3P12645 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BMP3P12645 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BMP3P12645 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
BMP3P12645 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
BMP3P12645 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
BMP3P12645 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
BMP3P12645 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BMP3P12645 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
BMP3P12645 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
BMP3P12645 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
BMP3P12645 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BMP3P12645 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BMP3P12645 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BMP3P12645 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BMP3P12645 MIR940-201ENST00000401276 94 ntBASIC20.37■□□□□ 0.85
BMP3P12645 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BMP3P12645 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms