Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC175P0C221 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC175P0C221 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC175P0C221 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC175P0C221 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CCDC175P0C221 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CCDC175P0C221 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CCDC175P0C221 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC175P0C221 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC175P0C221 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC175P0C221 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
CCDC175P0C221 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC175P0C221 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
CCDC175P0C221 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC175P0C221 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC175P0C221 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC175P0C221 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC175P0C221 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC175P0C221 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CCDC175P0C221 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC175P0C221 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CCDC175P0C221 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC175P0C221 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CCDC175P0C221 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC175P0C221 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.16■□□□□ 0.66
CCDC175P0C221 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC175P0C221 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.16■□□□□ 0.66
CCDC175P0C221 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.16■□□□□ 0.66
CCDC175P0C221 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC175P0C221 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC175P0C221 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC175P0C221 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CCDC175P0C221 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC175P0C221 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.16■□□□□ 0.66
CCDC175P0C221 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC175P0C221 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC175P0C221 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC175P0C221 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC175P0C221 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CCDC175P0C221 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC175P0C221 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC175P0C221 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
CCDC175P0C221 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC175P0C221 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CCDC175P0C221 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC175P0C221 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CCDC175P0C221 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC175P0C221 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC175P0C221 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC175P0C221 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
CCDC175P0C221 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC175P0C221 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CCDC175P0C221 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC175P0C221 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC175P0C221 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC175P0C221 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC175P0C221 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC175P0C221 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC175P0C221 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC175P0C221 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC175P0C221 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CCDC175P0C221 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC175P0C221 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC175P0C221 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CCDC175P0C221 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC175P0C221 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC175P0C221 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CCDC175P0C221 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC175P0C221 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC175P0C221 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC175P0C221 DDX43P3-201ENST00000441064 443 ntBASIC19.15■□□□□ 0.66
CCDC175P0C221 AC128676.1-201ENST00000454392 318 ntBASIC19.15■□□□□ 0.66
CCDC175P0C221 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC175P0C221 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CCDC175P0C221 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC175P0C221 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC175P0C221 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
CCDC175P0C221 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC175P0C221 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC175P0C221 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC175P0C221 AC016396.2-201ENST00000562575 1417 ntBASIC19.15■□□□□ 0.66
CCDC175P0C221 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CCDC175P0C221 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC175P0C221 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC175P0C221 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC175P0C221 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC175P0C221 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CCDC175P0C221 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC175P0C221 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC175P0C221 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC175P0C221 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC175P0C221 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC175P0C221 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC175P0C221 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC175P0C221 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CCDC175P0C221 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC175P0C221 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC175P0C221 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CCDC175P0C221 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC175P0C221 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms