Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RHOP08100 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RHOP08100 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.29■□□□□ 0.52
RHOP08100 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.29■□□□□ 0.52
RHOP08100 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
RHOP08100 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.29■□□□□ 0.52
RHOP08100 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RHOP08100 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RHOP08100 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.29■□□□□ 0.52
RHOP08100 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.29■□□□□ 0.52
RHOP08100 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.29■□□□□ 0.52
RHOP08100 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.29■□□□□ 0.52
RHOP08100 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RHOP08100 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.29■□□□□ 0.52
RHOP08100 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RHOP08100 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.29■□□□□ 0.52
RHOP08100 AC005829.1-201ENST00000570002 483 ntBASIC18.29■□□□□ 0.52
RHOP08100 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.29■□□□□ 0.52
RHOP08100 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RHOP08100 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RHOP08100 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RHOP08100 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RHOP08100 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RHOP08100 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RHOP08100 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.29■□□□□ 0.52
RHOP08100 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RHOP08100 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RHOP08100 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RHOP08100 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RHOP08100 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RHOP08100 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RHOP08100 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.28■□□□□ 0.52
RHOP08100 AC097637.2-201ENST00000624096 1997 ntBASIC18.28■□□□□ 0.52
RHOP08100 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.28■□□□□ 0.52
RHOP08100 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RHOP08100 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RHOP08100 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.28■□□□□ 0.52
RHOP08100 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.28■□□□□ 0.52
RHOP08100 AP006288.1-201ENST00000446065 395 ntBASIC18.28■□□□□ 0.52
RHOP08100 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RHOP08100 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.28■□□□□ 0.52
RHOP08100 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RHOP08100 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
RHOP08100 AL805961.1-202ENST00000641562 540 ntBASIC18.28■□□□□ 0.52
RHOP08100 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RHOP08100 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.28■□□□□ 0.52
RHOP08100 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RHOP08100 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.28■□□□□ 0.52
RHOP08100 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.28■□□□□ 0.52
RHOP08100 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.28■□□□□ 0.52
RHOP08100 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RHOP08100 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.28■□□□□ 0.52
RHOP08100 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.28■□□□□ 0.52
RHOP08100 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RHOP08100 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
RHOP08100 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
RHOP08100 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RHOP08100 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.27■□□□□ 0.52
RHOP08100 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RHOP08100 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RHOP08100 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RHOP08100 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RHOP08100 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RHOP08100 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
RHOP08100 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.27■□□□□ 0.52
RHOP08100 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.27■□□□□ 0.52
RHOP08100 AC009336.1-201ENST00000608941 1553 ntBASIC18.27■□□□□ 0.52
RHOP08100 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RHOP08100 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.27■□□□□ 0.52
RHOP08100 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.27■□□□□ 0.52
RHOP08100 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.27■□□□□ 0.52
RHOP08100 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.27■□□□□ 0.52
RHOP08100 ALG1L5P-201ENST00000482043 771 ntBASIC18.27■□□□□ 0.52
RHOP08100 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.27■□□□□ 0.52
RHOP08100 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.27■□□□□ 0.52
RHOP08100 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.27■□□□□ 0.52
RHOP08100 AC027796.2-201ENST00000575326 344 ntBASIC18.27■□□□□ 0.52
RHOP08100 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
RHOP08100 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.27■□□□□ 0.52
RHOP08100 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.51
RHOP08100 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.27■□□□□ 0.51
RHOP08100 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
RHOP08100 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RHOP08100 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RHOP08100 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RHOP08100 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RHOP08100 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RHOP08100 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.26■□□□□ 0.51
RHOP08100 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RHOP08100 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.26■□□□□ 0.51
RHOP08100 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RHOP08100 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
RHOP08100 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
RHOP08100 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.26■□□□□ 0.51
RHOP08100 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.26■□□□□ 0.51
RHOP08100 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
RHOP08100 YBX1P5-201ENST00000509441 847 ntBASIC18.26■□□□□ 0.51
RHOP08100 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.26■□□□□ 0.51
RHOP08100 MIR4469-201ENST00000583919 79 ntBASIC18.26■□□□□ 0.51
RHOP08100 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms