Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 DDX43P3-201ENST00000441064 443 ntBASIC16.77■□□□□ 0.28
CTSBP07858 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CTSBP07858 AF186996.4-201ENST00000467186 377 ntBASIC16.77■□□□□ 0.28
CTSBP07858 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.77■□□□□ 0.28
CTSBP07858 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.77■□□□□ 0.28
CTSBP07858 AC012640.2-201ENST00000561606 901 ntBASIC16.77■□□□□ 0.28
CTSBP07858 AP001005.1-201ENST00000571755 1248 ntBASIC16.77■□□□□ 0.28
CTSBP07858 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.77■□□□□ 0.28
CTSBP07858 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.77■□□□□ 0.28
CTSBP07858 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CTSBP07858 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.77■□□□□ 0.28
CTSBP07858 AL353593.2-201ENST00000602529 1483 ntBASIC16.77■□□□□ 0.28
CTSBP07858 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTSBP07858 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTSBP07858 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CTSBP07858 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTSBP07858 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.77■□□□□ 0.27
CTSBP07858 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.77■□□□□ 0.27
CTSBP07858 AC079776.2-201ENST00000641154 1609 ntBASIC16.77■□□□□ 0.27
CTSBP07858 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
CTSBP07858 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CTSBP07858 NOC2LP1-202ENST00000452600 2235 ntBASIC16.77■□□□□ 0.27
CTSBP07858 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CTSBP07858 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTSBP07858 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTSBP07858 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CTSBP07858 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTSBP07858 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.77■□□□□ 0.27
CTSBP07858 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTSBP07858 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTSBP07858 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTSBP07858 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSBP07858 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSBP07858 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSBP07858 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSBP07858 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSBP07858 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTSBP07858 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSBP07858 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CTSBP07858 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSBP07858 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSBP07858 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSBP07858 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.76■□□□□ 0.27
CTSBP07858 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.76■□□□□ 0.27
CTSBP07858 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CTSBP07858 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.76■□□□□ 0.27
CTSBP07858 AC073648.2-201ENST00000510116 352 ntBASIC16.76■□□□□ 0.27
CTSBP07858 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.76■□□□□ 0.27
CTSBP07858 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.76■□□□□ 0.27
CTSBP07858 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.76■□□□□ 0.27
CTSBP07858 AC116407.2-201ENST00000613639 860 ntBASIC16.76■□□□□ 0.27
CTSBP07858 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSBP07858 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.76■□□□□ 0.27
CTSBP07858 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSBP07858 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTSBP07858 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.76■□□□□ 0.27
CTSBP07858 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CTSBP07858 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSBP07858 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CTSBP07858 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSBP07858 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSBP07858 BX276092.7-203ENST00000637198 1536 ntBASIC16.75■□□□□ 0.27
CTSBP07858 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSBP07858 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.75■□□□□ 0.27
CTSBP07858 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTSBP07858 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTSBP07858 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.75■□□□□ 0.27
CTSBP07858 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.75■□□□□ 0.27
CTSBP07858 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.75■□□□□ 0.27
CTSBP07858 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CTSBP07858 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSBP07858 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSBP07858 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSBP07858 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.75■□□□□ 0.27
CTSBP07858 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSBP07858 SPDYE21P-201ENST00000413323 827 ntBASIC16.75■□□□□ 0.27
CTSBP07858 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.75■□□□□ 0.27
CTSBP07858 SCARNA2-201ENST00000458748 420 ntBASIC16.75■□□□□ 0.27
CTSBP07858 SLC25A1P1-201ENST00000528351 927 ntBASIC16.75■□□□□ 0.27
CTSBP07858 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.75■□□□□ 0.27
CTSBP07858 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.75■□□□□ 0.27
CTSBP07858 MTDHP4-201ENST00000600287 670 ntBASIC16.75■□□□□ 0.27
CTSBP07858 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.75■□□□□ 0.27
CTSBP07858 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSBP07858 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.75■□□□□ 0.27
CTSBP07858 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSBP07858 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSBP07858 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTSBP07858 AC006116.8-202ENST00000587620 1550 ntBASIC16.75■□□□□ 0.27
CTSBP07858 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CTSBP07858 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.75■□□□□ 0.27
CTSBP07858 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.75■□□□□ 0.27
CTSBP07858 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSBP07858 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSBP07858 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.75■□□□□ 0.27
CTSBP07858 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.75■□□□□ 0.27
CTSBP07858 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CTSBP07858 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSBP07858 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSBP07858 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms