Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
APOEP02649 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
APOEP02649 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
APOEP02649 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
APOEP02649 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
APOEP02649 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
APOEP02649 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
APOEP02649 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
APOEP02649 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
APOEP02649 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
APOEP02649 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
APOEP02649 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.59■□□□□ 0.57
APOEP02649 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.59■□□□□ 0.57
APOEP02649 AP005901.3-202ENST00000581653 237 ntBASIC18.59■□□□□ 0.57
APOEP02649 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
APOEP02649 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
APOEP02649 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
APOEP02649 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
APOEP02649 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
APOEP02649 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
APOEP02649 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.59■□□□□ 0.57
APOEP02649 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
APOEP02649 FLJ13224-201ENST00000313737 1514 ntBASIC18.59■□□□□ 0.57
APOEP02649 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
APOEP02649 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
APOEP02649 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.58■□□□□ 0.57
APOEP02649 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
APOEP02649 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
APOEP02649 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
APOEP02649 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
APOEP02649 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
APOEP02649 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
APOEP02649 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
APOEP02649 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
APOEP02649 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
APOEP02649 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.58■□□□□ 0.56
APOEP02649 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
APOEP02649 AC091607.1-201ENST00000490318 1060 ntBASIC18.58■□□□□ 0.56
APOEP02649 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
APOEP02649 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.58■□□□□ 0.56
APOEP02649 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.58■□□□□ 0.56
APOEP02649 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
APOEP02649 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
APOEP02649 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.58■□□□□ 0.56
APOEP02649 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
APOEP02649 NSUN5P1-202ENST00000421140 1535 ntBASIC18.58■□□□□ 0.56
APOEP02649 NSUN5P2-203ENST00000457352 1529 ntBASIC18.58■□□□□ 0.56
APOEP02649 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
APOEP02649 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
APOEP02649 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.58■□□□□ 0.56
APOEP02649 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.58■□□□□ 0.56
APOEP02649 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.58■□□□□ 0.56
APOEP02649 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
APOEP02649 LTB4R2-202ENST00000528054 3092 ntBASIC18.58■□□□□ 0.56
APOEP02649 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
APOEP02649 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
APOEP02649 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.57■□□□□ 0.56
APOEP02649 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.57■□□□□ 0.56
APOEP02649 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.57■□□□□ 0.56
APOEP02649 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
APOEP02649 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
APOEP02649 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
APOEP02649 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
APOEP02649 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
APOEP02649 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
APOEP02649 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
APOEP02649 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
APOEP02649 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.57■□□□□ 0.56
APOEP02649 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
APOEP02649 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
APOEP02649 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
APOEP02649 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.57■□□□□ 0.56
APOEP02649 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.57■□□□□ 0.56
APOEP02649 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.57■□□□□ 0.56
APOEP02649 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.57■□□□□ 0.56
APOEP02649 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.57■□□□□ 0.56
APOEP02649 AC099336.1-202ENST00000602961 463 ntBASIC18.57■□□□□ 0.56
APOEP02649 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
APOEP02649 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
APOEP02649 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
APOEP02649 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
APOEP02649 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
APOEP02649 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
APOEP02649 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
APOEP02649 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.57■□□□□ 0.56
APOEP02649 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
APOEP02649 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
APOEP02649 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.57■□□□□ 0.56
APOEP02649 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
APOEP02649 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
APOEP02649 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
APOEP02649 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
APOEP02649 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.57■□□□□ 0.56
APOEP02649 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
APOEP02649 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
APOEP02649 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
APOEP02649 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
APOEP02649 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
APOEP02649 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.56■□□□□ 0.56
APOEP02649 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms