Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CPNE6O95741 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE6O95741 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.42■□□□□ 0.38
CPNE6O95741 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE6O95741 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE6O95741 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE6O95741 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE6O95741 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE6O95741 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CPNE6O95741 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE6O95741 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.42■□□□□ 0.38
CPNE6O95741 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.42■□□□□ 0.38
CPNE6O95741 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
CPNE6O95741 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.42■□□□□ 0.38
CPNE6O95741 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.42■□□□□ 0.38
CPNE6O95741 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.42■□□□□ 0.38
CPNE6O95741 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.42■□□□□ 0.38
CPNE6O95741 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.42■□□□□ 0.38
CPNE6O95741 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CPNE6O95741 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE6O95741 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE6O95741 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.42■□□□□ 0.38
CPNE6O95741 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE6O95741 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE6O95741 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE6O95741 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CPNE6O95741 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE6O95741 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CPNE6O95741 HLA-A-201ENST00000376802 1334 ntBASIC17.42■□□□□ 0.38
CPNE6O95741 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CPNE6O95741 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE6O95741 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE6O95741 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
CPNE6O95741 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE6O95741 AC106820.2-201ENST00000563775 3264 ntBASIC17.41■□□□□ 0.38
CPNE6O95741 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE6O95741 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE6O95741 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE6O95741 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE6O95741 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.41■□□□□ 0.38
CPNE6O95741 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE6O95741 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.41■□□□□ 0.38
CPNE6O95741 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.41■□□□□ 0.38
CPNE6O95741 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.41■□□□□ 0.38
CPNE6O95741 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE6O95741 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE6O95741 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE6O95741 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE6O95741 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.41■□□□□ 0.38
CPNE6O95741 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.41■□□□□ 0.38
CPNE6O95741 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CPNE6O95741 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE6O95741 AC005336.2-201ENST00000593183 939 ntBASIC17.41■□□□□ 0.38
CPNE6O95741 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CPNE6O95741 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.41■□□□□ 0.38
CPNE6O95741 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE6O95741 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE6O95741 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE6O95741 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.41■□□□□ 0.38
CPNE6O95741 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CPNE6O95741 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
CPNE6O95741 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CPNE6O95741 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CPNE6O95741 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE6O95741 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CPNE6O95741 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE6O95741 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE6O95741 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
CPNE6O95741 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.4■□□□□ 0.38
CPNE6O95741 PCDHA12-202ENST00000613593 2588 ntBASIC17.4■□□□□ 0.38
CPNE6O95741 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CPNE6O95741 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE6O95741 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CPNE6O95741 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE6O95741 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE6O95741 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE6O95741 LINC00602-201ENST00000629776 2065 ntBASIC17.4■□□□□ 0.38
CPNE6O95741 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CPNE6O95741 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.4■□□□□ 0.38
CPNE6O95741 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE6O95741 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE6O95741 TP73-AS1-210ENST00000637775 1455 ntBASIC17.4■□□□□ 0.38
CPNE6O95741 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.4■□□□□ 0.38
CPNE6O95741 MTCL1P1-201ENST00000446207 792 ntBASIC17.4■□□□□ 0.38
CPNE6O95741 AC132008.2-207ENST00000454517 770 ntBASIC17.4■□□□□ 0.38
CPNE6O95741 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.4■□□□□ 0.38
CPNE6O95741 AC009533.2-201ENST00000543664 586 ntBASIC17.4■□□□□ 0.38
CPNE6O95741 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.4■□□□□ 0.38
CPNE6O95741 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE6O95741 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE6O95741 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE6O95741 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE6O95741 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE6O95741 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE6O95741 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE6O95741 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE6O95741 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE6O95741 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE6O95741 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE6O95741 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.39■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms