Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH16O75309 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.94■□□□□ 0.46
CDH16O75309 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH16O75309 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH16O75309 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
CDH16O75309 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH16O75309 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH16O75309 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.94■□□□□ 0.46
CDH16O75309 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH16O75309 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
CDH16O75309 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
CDH16O75309 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.94■□□□□ 0.46
CDH16O75309 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
CDH16O75309 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.94■□□□□ 0.46
CDH16O75309 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CDH16O75309 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CDH16O75309 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CDH16O75309 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
CDH16O75309 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CDH16O75309 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.93■□□□□ 0.46
CDH16O75309 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH16O75309 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CDH16O75309 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH16O75309 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH16O75309 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH16O75309 AC060834.1-201ENST00000443027 2032 ntBASIC17.93■□□□□ 0.46
CDH16O75309 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH16O75309 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH16O75309 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH16O75309 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH16O75309 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.93■□□□□ 0.46
CDH16O75309 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.93■□□□□ 0.46
CDH16O75309 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.93■□□□□ 0.46
CDH16O75309 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH16O75309 AC093827.2-201ENST00000512654 315 ntBASIC17.93■□□□□ 0.46
CDH16O75309 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
CDH16O75309 AC233702.5-201ENST00000584107 538 ntBASIC17.93■□□□□ 0.46
CDH16O75309 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH16O75309 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH16O75309 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH16O75309 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH16O75309 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH16O75309 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH16O75309 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH16O75309 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CDH16O75309 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
CDH16O75309 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CDH16O75309 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH16O75309 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CDH16O75309 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CDH16O75309 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH16O75309 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CDH16O75309 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CDH16O75309 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH16O75309 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.92■□□□□ 0.46
CDH16O75309 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH16O75309 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CDH16O75309 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH16O75309 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH16O75309 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH16O75309 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH16O75309 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH16O75309 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.92■□□□□ 0.46
CDH16O75309 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.92■□□□□ 0.46
CDH16O75309 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH16O75309 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.92■□□□□ 0.46
CDH16O75309 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CDH16O75309 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH16O75309 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CDH16O75309 RPS2P55-201ENST00000397318 883 ntBASIC17.92■□□□□ 0.46
CDH16O75309 AC107956.1-201ENST00000494359 873 ntBASIC17.92■□□□□ 0.46
CDH16O75309 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH16O75309 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH16O75309 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CDH16O75309 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH16O75309 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH16O75309 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH16O75309 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH16O75309 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH16O75309 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.92■□□□□ 0.46
CDH16O75309 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.92■□□□□ 0.46
CDH16O75309 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH16O75309 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH16O75309 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH16O75309 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.91■□□□□ 0.46
CDH16O75309 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CDH16O75309 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CDH16O75309 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH16O75309 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CDH16O75309 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH16O75309 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH16O75309 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH16O75309 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.91■□□□□ 0.46
CDH16O75309 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH16O75309 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH16O75309 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
CDH16O75309 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CDH16O75309 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CDH16O75309 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH16O75309 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms