Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC28A2O43868 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC28A2O43868 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC28A2O43868 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC28A2O43868 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC28A2O43868 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC28A2O43868 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC28A2O43868 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC28A2O43868 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC28A2O43868 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.11■□□□□ 0.33
SLC28A2O43868 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC28A2O43868 RNF126P1-202ENST00000569893 925 ntBASIC17.11■□□□□ 0.33
SLC28A2O43868 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.11■□□□□ 0.33
SLC28A2O43868 Z69720.1-201ENST00000601483 472 ntBASIC17.11■□□□□ 0.33
SLC28A2O43868 IGHV3-41-201ENST00000613121 348 ntBASIC17.11■□□□□ 0.33
SLC28A2O43868 REXO1L6P-202ENST00000619970 1078 ntBASIC17.11■□□□□ 0.33
SLC28A2O43868 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.11■□□□□ 0.33
SLC28A2O43868 AC079602.3-201ENST00000623931 403 ntBASIC17.11■□□□□ 0.33
SLC28A2O43868 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC28A2O43868 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC28A2O43868 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC28A2O43868 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC28A2O43868 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SLC28A2O43868 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC28A2O43868 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC28A2O43868 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC28A2O43868 AL096828.2-201ENST00000567259 1965 ntBASIC17.11■□□□□ 0.33
SLC28A2O43868 AC009102.3-201ENST00000623118 1491 ntBASIC17.11■□□□□ 0.33
SLC28A2O43868 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC28A2O43868 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.11■□□□□ 0.33
SLC28A2O43868 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC28A2O43868 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC28A2O43868 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC28A2O43868 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC28A2O43868 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC28A2O43868 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC28A2O43868 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC28A2O43868 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC28A2O43868 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC28A2O43868 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC28A2O43868 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC28A2O43868 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
SLC28A2O43868 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SLC28A2O43868 MIR662-201ENST00000384847 95 ntBASIC17.1■□□□□ 0.33
SLC28A2O43868 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.1■□□□□ 0.33
SLC28A2O43868 HLA-F-220ENST00000434407 884 ntBASIC17.1■□□□□ 0.33
SLC28A2O43868 AF186996.4-201ENST00000467186 377 ntBASIC17.1■□□□□ 0.33
SLC28A2O43868 AF238378.1-201ENST00000526806 358 ntBASIC17.1■□□□□ 0.33
SLC28A2O43868 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC28A2O43868 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.1■□□□□ 0.33
SLC28A2O43868 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC28A2O43868 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.1■□□□□ 0.33
SLC28A2O43868 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC28A2O43868 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC28A2O43868 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
SLC28A2O43868 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SLC28A2O43868 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC28A2O43868 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC28A2O43868 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC28A2O43868 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC28A2O43868 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SLC28A2O43868 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC28A2O43868 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC28A2O43868 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
SLC28A2O43868 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SLC28A2O43868 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC28A2O43868 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC28A2O43868 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC28A2O43868 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC28A2O43868 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC28A2O43868 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SLC28A2O43868 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC28A2O43868 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SLC28A2O43868 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC28A2O43868 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC28A2O43868 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC28A2O43868 MIR149-201ENST00000384879 89 ntBASIC17.09■□□□□ 0.33
SLC28A2O43868 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC28A2O43868 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC28A2O43868 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC28A2O43868 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC28A2O43868 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC28A2O43868 AC090616.6-201ENST00000582640 721 ntBASIC17.09■□□□□ 0.33
SLC28A2O43868 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC28A2O43868 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC28A2O43868 ZNF259P1-201ENST00000407656 1365 ntBASIC17.09■□□□□ 0.33
SLC28A2O43868 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC28A2O43868 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC28A2O43868 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.09■□□□□ 0.33
SLC28A2O43868 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC28A2O43868 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC28A2O43868 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC28A2O43868 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC28A2O43868 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC28A2O43868 PHGDH-209ENST00000641074 1780 ntBASIC17.09■□□□□ 0.33
SLC28A2O43868 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC28A2O43868 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC28A2O43868 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC28A2O43868 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC28A2O43868 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms