Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SNAI2O43623 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC13.32□□□□□ -0.28
SNAI2O43623 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNAI2O43623 UROS-202ENST00000368778 1556 ntTSL 2 BASIC13.32□□□□□ -0.28
SNAI2O43623 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNAI2O43623 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SNAI2O43623 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
SNAI2O43623 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SNAI2O43623 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNAI2O43623 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
SNAI2O43623 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNAI2O43623 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNAI2O43623 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNAI2O43623 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNAI2O43623 PCDHB19P-201ENST00000570871 2371 ntBASIC13.31□□□□□ -0.28
SNAI2O43623 GPAT2P1-201ENST00000444924 1672 ntBASIC13.31□□□□□ -0.28
SNAI2O43623 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNAI2O43623 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC13.31□□□□□ -0.28
SNAI2O43623 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNAI2O43623 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNAI2O43623 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
SNAI2O43623 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC13.31□□□□□ -0.28
SNAI2O43623 LINC02199-201ENST00000506655 2702 ntBASIC13.31□□□□□ -0.28
SNAI2O43623 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
SNAI2O43623 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SNAI2O43623 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.31□□□□□ -0.28
SNAI2O43623 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SNAI2O43623 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNAI2O43623 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
SNAI2O43623 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
SNAI2O43623 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SNAI2O43623 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNAI2O43623 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNAI2O43623 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
SNAI2O43623 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC13.31□□□□□ -0.28
SNAI2O43623 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC13.31□□□□□ -0.28
SNAI2O43623 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC13.31□□□□□ -0.28
SNAI2O43623 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SNAI2O43623 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNAI2O43623 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SNAI2O43623 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNAI2O43623 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNAI2O43623 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
SNAI2O43623 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNAI2O43623 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNAI2O43623 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNAI2O43623 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
SNAI2O43623 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNAI2O43623 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.31□□□□□ -0.28
SNAI2O43623 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SNAI2O43623 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SNAI2O43623 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNAI2O43623 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNAI2O43623 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNAI2O43623 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNAI2O43623 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SNAI2O43623 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC13.31□□□□□ -0.28
SNAI2O43623 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
SNAI2O43623 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNAI2O43623 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC13.31□□□□□ -0.28
SNAI2O43623 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNAI2O43623 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SNAI2O43623 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC13.3□□□□□ -0.28
SNAI2O43623 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNAI2O43623 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SNAI2O43623 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
SNAI2O43623 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SNAI2O43623 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNAI2O43623 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNAI2O43623 CYP51A1P1-201ENST00000492267 1507 ntBASIC13.3□□□□□ -0.28
SNAI2O43623 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SNAI2O43623 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SNAI2O43623 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNAI2O43623 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNAI2O43623 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNAI2O43623 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNAI2O43623 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SNAI2O43623 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC13.3□□□□□ -0.28
SNAI2O43623 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNAI2O43623 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SNAI2O43623 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC13.3□□□□□ -0.28
SNAI2O43623 B3GAT3P1-201ENST00000471720 806 ntBASIC13.3□□□□□ -0.28
SNAI2O43623 FDX2-207ENST00000494368 584 ntTSL 4 BASIC13.3□□□□□ -0.28
SNAI2O43623 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC13.3□□□□□ -0.28
SNAI2O43623 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC13.3□□□□□ -0.28
SNAI2O43623 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC13.3□□□□□ -0.28
SNAI2O43623 MIR6786-201ENST00000616843 113 ntBASIC13.3□□□□□ -0.28
SNAI2O43623 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
SNAI2O43623 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNAI2O43623 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC13.3□□□□□ -0.28
SNAI2O43623 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNAI2O43623 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC13.3□□□□□ -0.28
SNAI2O43623 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNAI2O43623 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
SNAI2O43623 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNAI2O43623 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNAI2O43623 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNAI2O43623 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SNAI2O43623 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNAI2O43623 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms