Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC12.16□□□□□ -0.46
NDUFA1O15239 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
NDUFA1O15239 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFA1O15239 AC009102.3-201ENST00000623118 1491 ntBASIC12.16□□□□□ -0.46
NDUFA1O15239 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
NDUFA1O15239 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFA1O15239 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFA1O15239 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFA1O15239 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFA1O15239 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFA1O15239 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFA1O15239 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFA1O15239 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFA1O15239 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFA1O15239 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFA1O15239 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFA1O15239 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFA1O15239 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFA1O15239 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
NDUFA1O15239 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC12.16□□□□□ -0.46
NDUFA1O15239 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFA1O15239 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC12.16□□□□□ -0.46
NDUFA1O15239 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFA1O15239 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC12.16□□□□□ -0.46
NDUFA1O15239 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
NDUFA1O15239 DECR2-212ENST00000627716 352 ntTSL 2 BASIC12.16□□□□□ -0.46
NDUFA1O15239 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
NDUFA1O15239 AC105020.1-201ENST00000435356 2205 ntBASIC12.16□□□□□ -0.46
NDUFA1O15239 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFA1O15239 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFA1O15239 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFA1O15239 UBALD1-205ENST00000590891 2641 ntBASIC12.16□□□□□ -0.46
NDUFA1O15239 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
NDUFA1O15239 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFA1O15239 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFA1O15239 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFA1O15239 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFA1O15239 OS9-205ENST00000413095 1660 ntTSL 2 BASIC12.16□□□□□ -0.46
NDUFA1O15239 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC12.16□□□□□ -0.46
NDUFA1O15239 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFA1O15239 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFA1O15239 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
NDUFA1O15239 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC12.15□□□□□ -0.46
NDUFA1O15239 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
NDUFA1O15239 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
NDUFA1O15239 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NDUFA1O15239 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC12.15□□□□□ -0.46
NDUFA1O15239 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
NDUFA1O15239 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NDUFA1O15239 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NDUFA1O15239 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NDUFA1O15239 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC12.15□□□□□ -0.46
NDUFA1O15239 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
NDUFA1O15239 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NDUFA1O15239 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
NDUFA1O15239 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
NDUFA1O15239 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC12.15□□□□□ -0.46
NDUFA1O15239 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC12.15□□□□□ -0.46
NDUFA1O15239 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
NDUFA1O15239 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
NDUFA1O15239 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC12.15□□□□□ -0.46
NDUFA1O15239 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NDUFA1O15239 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC12.15□□□□□ -0.46
NDUFA1O15239 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
NDUFA1O15239 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
NDUFA1O15239 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
NDUFA1O15239 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NDUFA1O15239 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NDUFA1O15239 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NDUFA1O15239 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
NDUFA1O15239 MIR149-201ENST00000384879 89 ntBASIC12.15□□□□□ -0.46
NDUFA1O15239 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC12.15□□□□□ -0.46
NDUFA1O15239 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC12.15□□□□□ -0.46
NDUFA1O15239 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
NDUFA1O15239 AC097488.1-201ENST00000507834 756 ntBASIC12.15□□□□□ -0.46
NDUFA1O15239 NUDT16P1-203ENST00000513809 620 ntBASIC12.15□□□□□ -0.46
NDUFA1O15239 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC12.15□□□□□ -0.46
NDUFA1O15239 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC12.15□□□□□ -0.46
NDUFA1O15239 AC009065.1-201ENST00000564055 1225 ntBASIC12.15□□□□□ -0.46
NDUFA1O15239 MIR3180-5-201ENST00000583743 153 ntBASIC12.15□□□□□ -0.46
NDUFA1O15239 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC12.15□□□□□ -0.46
NDUFA1O15239 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
NDUFA1O15239 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC12.15□□□□□ -0.46
NDUFA1O15239 ITM2C-210ENST00000620962 501 ntBASIC12.15□□□□□ -0.46
NDUFA1O15239 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NDUFA1O15239 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NDUFA1O15239 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NDUFA1O15239 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
NDUFA1O15239 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NDUFA1O15239 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NDUFA1O15239 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NDUFA1O15239 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NDUFA1O15239 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC12.15□□□□□ -0.46
NDUFA1O15239 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
NDUFA1O15239 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
NDUFA1O15239 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC12.15□□□□□ -0.46
NDUFA1O15239 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC12.15□□□□□ -0.46
NDUFA1O15239 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
NDUFA1O15239 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC12.15□□□□□ -0.47
NDUFA1O15239 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms