Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN5O00501 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.7■□□□□ 0.58
CLDN5O00501 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN5O00501 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN5O00501 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.69■□□□□ 0.58
CLDN5O00501 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN5O00501 BX276092.7-203ENST00000637198 1536 ntBASIC18.69■□□□□ 0.58
CLDN5O00501 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CLDN5O00501 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN5O00501 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.69■□□□□ 0.58
CLDN5O00501 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN5O00501 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN5O00501 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.69■□□□□ 0.58
CLDN5O00501 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN5O00501 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN5O00501 KRT8P10-201ENST00000450021 1447 ntBASIC18.69■□□□□ 0.58
CLDN5O00501 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.69■□□□□ 0.58
CLDN5O00501 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.69■□□□□ 0.58
CLDN5O00501 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN5O00501 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN5O00501 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN5O00501 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.69■□□□□ 0.58
CLDN5O00501 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.69■□□□□ 0.58
CLDN5O00501 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.69■□□□□ 0.58
CLDN5O00501 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.69■□□□□ 0.58
CLDN5O00501 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.69■□□□□ 0.58
CLDN5O00501 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.69■□□□□ 0.58
CLDN5O00501 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.69■□□□□ 0.58
CLDN5O00501 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.69■□□□□ 0.58
CLDN5O00501 AP000867.4-201ENST00000641616 219 ntBASIC18.69■□□□□ 0.58
CLDN5O00501 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN5O00501 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN5O00501 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN5O00501 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CLDN5O00501 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN5O00501 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN5O00501 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
CLDN5O00501 AL049757.1-201ENST00000616842 1596 ntBASIC18.68■□□□□ 0.58
CLDN5O00501 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.68■□□□□ 0.58
CLDN5O00501 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN5O00501 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN5O00501 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN5O00501 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.68■□□□□ 0.58
CLDN5O00501 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN5O00501 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN5O00501 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN5O00501 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.68■□□□□ 0.58
CLDN5O00501 MRPL3P1-201ENST00000400109 1033 ntBASIC18.68■□□□□ 0.58
CLDN5O00501 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.68■□□□□ 0.58
CLDN5O00501 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.68■□□□□ 0.58
CLDN5O00501 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.68■□□□□ 0.58
CLDN5O00501 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN5O00501 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.68■□□□□ 0.58
CLDN5O00501 AC019129.2-201ENST00000609837 1235 ntBASIC18.68■□□□□ 0.58
CLDN5O00501 AD001527.2-201ENST00000622994 785 ntBASIC18.68■□□□□ 0.58
CLDN5O00501 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.68■□□□□ 0.58
CLDN5O00501 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN5O00501 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.68■□□□□ 0.58
CLDN5O00501 AC008764.6-201ENST00000595909 2069 ntBASIC18.68■□□□□ 0.58
CLDN5O00501 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN5O00501 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN5O00501 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN5O00501 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN5O00501 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.68■□□□□ 0.58
CLDN5O00501 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN5O00501 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CLDN5O00501 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.68■□□□□ 0.58
CLDN5O00501 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.68■□□□□ 0.58
CLDN5O00501 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN5O00501 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN5O00501 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN5O00501 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN5O00501 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.67■□□□□ 0.58
CLDN5O00501 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN5O00501 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
CLDN5O00501 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN5O00501 REXO1L11P-201ENST00000620964 1927 ntBASIC18.67■□□□□ 0.58
CLDN5O00501 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN5O00501 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN5O00501 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN5O00501 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN5O00501 RBM17P3-201ENST00000417687 1192 ntBASIC18.67■□□□□ 0.58
CLDN5O00501 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.67■□□□□ 0.58
CLDN5O00501 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
CLDN5O00501 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CLDN5O00501 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN5O00501 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.67■□□□□ 0.58
CLDN5O00501 AC109462.3-201ENST00000573934 613 ntBASIC18.67■□□□□ 0.58
CLDN5O00501 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CLDN5O00501 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN5O00501 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN5O00501 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.67■□□□□ 0.58
CLDN5O00501 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN5O00501 AC006116.8-202ENST00000587620 1550 ntBASIC18.67■□□□□ 0.58
CLDN5O00501 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN5O00501 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
CLDN5O00501 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.67■□□□□ 0.58
CLDN5O00501 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN5O00501 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN5O00501 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms