Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RTCAO00442 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTCAO00442 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RTCAO00442 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RTCAO00442 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTCAO00442 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTCAO00442 AP002383.4-201ENST00000442518 975 ntBASIC16.93■□□□□ 0.3
RTCAO00442 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RTCAO00442 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.93■□□□□ 0.3
RTCAO00442 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.93■□□□□ 0.3
RTCAO00442 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTCAO00442 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.93■□□□□ 0.3
RTCAO00442 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.93■□□□□ 0.3
RTCAO00442 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTCAO00442 REXO1L11P-201ENST00000620964 1927 ntBASIC16.93■□□□□ 0.3
RTCAO00442 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RTCAO00442 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTCAO00442 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RTCAO00442 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTCAO00442 KRT18P1-202ENST00000452408 1331 ntBASIC16.93■□□□□ 0.3
RTCAO00442 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTCAO00442 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTCAO00442 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
RTCAO00442 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTCAO00442 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTCAO00442 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
RTCAO00442 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTCAO00442 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTCAO00442 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.92■□□□□ 0.3
RTCAO00442 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTCAO00442 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RTCAO00442 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTCAO00442 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RTCAO00442 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTCAO00442 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.92■□□□□ 0.3
RTCAO00442 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RTCAO00442 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTCAO00442 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.92■□□□□ 0.3
RTCAO00442 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.92■□□□□ 0.3
RTCAO00442 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RTCAO00442 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTCAO00442 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.92■□□□□ 0.3
RTCAO00442 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RTCAO00442 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.92■□□□□ 0.3
RTCAO00442 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.92■□□□□ 0.3
RTCAO00442 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RTCAO00442 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTCAO00442 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
RTCAO00442 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTCAO00442 OR6D1P-202ENST00000641007 5290 ntBASIC16.92■□□□□ 0.3
RTCAO00442 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RTCAO00442 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RTCAO00442 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTCAO00442 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.92■□□□□ 0.3
RTCAO00442 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTCAO00442 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RTCAO00442 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTCAO00442 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTCAO00442 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.91■□□□□ 0.3
RTCAO00442 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTCAO00442 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTCAO00442 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RTCAO00442 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTCAO00442 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.91■□□□□ 0.3
RTCAO00442 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RTCAO00442 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.91■□□□□ 0.3
RTCAO00442 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.91■□□□□ 0.3
RTCAO00442 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RTCAO00442 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.91■□□□□ 0.3
RTCAO00442 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTCAO00442 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTCAO00442 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RTCAO00442 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTCAO00442 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTCAO00442 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTCAO00442 PP12613-201ENST00000424958 2230 ntBASIC16.91■□□□□ 0.3
RTCAO00442 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.91■□□□□ 0.3
RTCAO00442 AC011840.4-201ENST00000578471 627 ntBASIC16.91■□□□□ 0.3
RTCAO00442 AP002414.4-201ENST00000589764 1148 ntBASIC16.91■□□□□ 0.3
RTCAO00442 AC005336.2-201ENST00000593183 939 ntBASIC16.91■□□□□ 0.3
RTCAO00442 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RTCAO00442 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTCAO00442 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTCAO00442 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.91■□□□□ 0.3
RTCAO00442 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.91■□□□□ 0.3
RTCAO00442 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RTCAO00442 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTCAO00442 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTCAO00442 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTCAO00442 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.9■□□□□ 0.3
RTCAO00442 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RTCAO00442 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.9■□□□□ 0.3
RTCAO00442 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTCAO00442 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RTCAO00442 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RTCAO00442 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTCAO00442 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RTCAO00442 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.9■□□□□ 0.3
RTCAO00442 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.9■□□□□ 0.3
RTCAO00442 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms