Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN3O00409 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN3O00409 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.98■□□□□ 0.63
FOXN3O00409 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN3O00409 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN3O00409 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.98■□□□□ 0.63
FOXN3O00409 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.98■□□□□ 0.63
FOXN3O00409 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.98■□□□□ 0.63
FOXN3O00409 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN3O00409 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN3O00409 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN3O00409 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN3O00409 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.98■□□□□ 0.63
FOXN3O00409 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.98■□□□□ 0.63
FOXN3O00409 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.98■□□□□ 0.63
FOXN3O00409 KRT8P26-201ENST00000534154 1276 ntBASIC18.98■□□□□ 0.63
FOXN3O00409 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.98■□□□□ 0.63
FOXN3O00409 AL353801.3-201ENST00000609898 542 ntBASIC18.98■□□□□ 0.63
FOXN3O00409 AL592071.1-201ENST00000611956 408 ntBASIC18.98■□□□□ 0.63
FOXN3O00409 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.98■□□□□ 0.63
FOXN3O00409 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.98■□□□□ 0.63
FOXN3O00409 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.98■□□□□ 0.63
FOXN3O00409 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN3O00409 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.98■□□□□ 0.63
FOXN3O00409 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN3O00409 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN3O00409 AC138932.1-201ENST00000534164 6830 ntBASIC18.98■□□□□ 0.63
FOXN3O00409 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN3O00409 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN3O00409 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
FOXN3O00409 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN3O00409 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN3O00409 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN3O00409 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN3O00409 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.97■□□□□ 0.63
FOXN3O00409 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN3O00409 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN3O00409 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN3O00409 AC005104.2-201ENST00000427818 678 ntBASIC18.97■□□□□ 0.63
FOXN3O00409 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN3O00409 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.97■□□□□ 0.63
FOXN3O00409 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN3O00409 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN3O00409 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
FOXN3O00409 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
FOXN3O00409 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.97■□□□□ 0.63
FOXN3O00409 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN3O00409 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
FOXN3O00409 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.97■□□□□ 0.63
FOXN3O00409 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN3O00409 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN3O00409 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.97■□□□□ 0.63
FOXN3O00409 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN3O00409 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
FOXN3O00409 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN3O00409 AC080080.1-201ENST00000625121 2420 ntBASIC18.96■□□□□ 0.63
FOXN3O00409 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.96■□□□□ 0.63
FOXN3O00409 AL023806.1-201ENST00000603994 1649 ntBASIC18.96■□□□□ 0.63
FOXN3O00409 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN3O00409 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
FOXN3O00409 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN3O00409 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN3O00409 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.96■□□□□ 0.63
FOXN3O00409 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN3O00409 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN3O00409 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN3O00409 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.96■□□□□ 0.63
FOXN3O00409 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
FOXN3O00409 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN3O00409 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
FOXN3O00409 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN3O00409 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.96■□□□□ 0.63
FOXN3O00409 AC090616.6-201ENST00000582640 721 ntBASIC18.96■□□□□ 0.63
FOXN3O00409 IGHV3-41-201ENST00000613121 348 ntBASIC18.96■□□□□ 0.63
FOXN3O00409 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.96■□□□□ 0.63
FOXN3O00409 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN3O00409 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN3O00409 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN3O00409 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
FOXN3O00409 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
FOXN3O00409 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
FOXN3O00409 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN3O00409 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.96■□□□□ 0.63
FOXN3O00409 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
FOXN3O00409 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.96■□□□□ 0.63
FOXN3O00409 AC020916.1-201ENST00000587762 1774 ntBASIC18.96■□□□□ 0.63
FOXN3O00409 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
FOXN3O00409 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
FOXN3O00409 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.95■□□□□ 0.62
FOXN3O00409 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.95■□□□□ 0.62
FOXN3O00409 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.95■□□□□ 0.62
FOXN3O00409 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.95■□□□□ 0.62
FOXN3O00409 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXN3O00409 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
FOXN3O00409 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
FOXN3O00409 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
FOXN3O00409 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXN3O00409 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXN3O00409 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXN3O00409 COX5BP2-201ENST00000392354 334 ntBASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms