Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NACAE9PAV3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
NACAE9PAV3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
NACAE9PAV3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC13□□□□□ -0.33
NACAE9PAV3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
NACAE9PAV3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NACAE9PAV3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NACAE9PAV3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC13□□□□□ -0.33
NACAE9PAV3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC13□□□□□ -0.33
NACAE9PAV3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
NACAE9PAV3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NACAE9PAV3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC13□□□□□ -0.33
NACAE9PAV3 KRT8P7-201ENST00000533003 1432 ntBASIC13□□□□□ -0.33
NACAE9PAV3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NACAE9PAV3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
NACAE9PAV3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NACAE9PAV3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13□□□□□ -0.33
NACAE9PAV3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13□□□□□ -0.33
NACAE9PAV3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC13□□□□□ -0.33
NACAE9PAV3 NMU-205ENST00000511469 756 ntTSL 3 BASIC13□□□□□ -0.33
NACAE9PAV3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC13□□□□□ -0.33
NACAE9PAV3 VENTXP5-201ENST00000523979 775 ntBASIC13□□□□□ -0.33
NACAE9PAV3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NACAE9PAV3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC13□□□□□ -0.33
NACAE9PAV3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NACAE9PAV3 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13□□□□□ -0.33
NACAE9PAV3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NACAE9PAV3 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
NACAE9PAV3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC13□□□□□ -0.33
NACAE9PAV3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
NACAE9PAV3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC13□□□□□ -0.33
NACAE9PAV3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NACAE9PAV3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC13□□□□□ -0.33
NACAE9PAV3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC13□□□□□ -0.33
NACAE9PAV3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC13□□□□□ -0.33
NACAE9PAV3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NACAE9PAV3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NACAE9PAV3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC13□□□□□ -0.33
NACAE9PAV3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
NACAE9PAV3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC13□□□□□ -0.33
NACAE9PAV3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NACAE9PAV3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NACAE9PAV3 STARP1-201ENST00000397973 869 ntBASIC13□□□□□ -0.33
NACAE9PAV3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NACAE9PAV3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13□□□□□ -0.33
NACAE9PAV3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC13□□□□□ -0.33
NACAE9PAV3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC13□□□□□ -0.33
NACAE9PAV3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC13□□□□□ -0.33
NACAE9PAV3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC13□□□□□ -0.33
NACAE9PAV3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC13□□□□□ -0.33
NACAE9PAV3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC13□□□□□ -0.33
NACAE9PAV3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC13□□□□□ -0.33
NACAE9PAV3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NACAE9PAV3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13□□□□□ -0.33
NACAE9PAV3 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NACAE9PAV3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC12.99□□□□□ -0.33
NACAE9PAV3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
NACAE9PAV3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
NACAE9PAV3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC12.99□□□□□ -0.33
NACAE9PAV3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NACAE9PAV3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC12.99□□□□□ -0.33
NACAE9PAV3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NACAE9PAV3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NACAE9PAV3 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
NACAE9PAV3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NACAE9PAV3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC12.99□□□□□ -0.33
NACAE9PAV3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NACAE9PAV3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC12.99□□□□□ -0.33
NACAE9PAV3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NACAE9PAV3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
NACAE9PAV3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NACAE9PAV3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
NACAE9PAV3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NACAE9PAV3 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NACAE9PAV3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC12.99□□□□□ -0.33
NACAE9PAV3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NACAE9PAV3 KRT18P38-201ENST00000449496 1282 ntBASIC12.99□□□□□ -0.33
NACAE9PAV3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
NACAE9PAV3 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC12.99□□□□□ -0.33
NACAE9PAV3 AC092647.4-201ENST00000457211 535 ntBASIC12.99□□□□□ -0.33
NACAE9PAV3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NACAE9PAV3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
NACAE9PAV3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC12.99□□□□□ -0.33
NACAE9PAV3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
NACAE9PAV3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NACAE9PAV3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NACAE9PAV3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NACAE9PAV3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NACAE9PAV3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
NACAE9PAV3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
NACAE9PAV3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NACAE9PAV3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NACAE9PAV3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NACAE9PAV3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
NACAE9PAV3 AC006116.8-202ENST00000587620 1550 ntBASIC12.99□□□□□ -0.33
NACAE9PAV3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NACAE9PAV3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
NACAE9PAV3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NACAE9PAV3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NACAE9PAV3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms