Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
SRRM4A7MD48 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SRRM4A7MD48 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.3□□□□□ -0.12
SRRM4A7MD48 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SRRM4A7MD48 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SRRM4A7MD48 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SRRM4A7MD48 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SRRM4A7MD48 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SRRM4A7MD48 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SRRM4A7MD48 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC14.3□□□□□ -0.12
SRRM4A7MD48 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SRRM4A7MD48 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SRRM4A7MD48 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.3□□□□□ -0.12
SRRM4A7MD48 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SRRM4A7MD48 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.3□□□□□ -0.12
SRRM4A7MD48 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRRM4A7MD48 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRRM4A7MD48 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRRM4A7MD48 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.29□□□□□ -0.12
SRRM4A7MD48 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRRM4A7MD48 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRRM4A7MD48 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SRRM4A7MD48 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRRM4A7MD48 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC14.29□□□□□ -0.12
SRRM4A7MD48 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRRM4A7MD48 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.29□□□□□ -0.12
SRRM4A7MD48 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SRRM4A7MD48 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.29□□□□□ -0.12
SRRM4A7MD48 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.29□□□□□ -0.12
SRRM4A7MD48 MTCL1P1-201ENST00000446207 792 ntBASIC14.29□□□□□ -0.12
SRRM4A7MD48 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRRM4A7MD48 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC14.29□□□□□ -0.12
SRRM4A7MD48 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.29□□□□□ -0.12
SRRM4A7MD48 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.29□□□□□ -0.12
SRRM4A7MD48 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
SRRM4A7MD48 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SRRM4A7MD48 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SRRM4A7MD48 PKD1P1-201ENST00000458669 6805 ntBASIC14.29□□□□□ -0.12
SRRM4A7MD48 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRRM4A7MD48 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SRRM4A7MD48 AL023806.1-201ENST00000603994 1649 ntBASIC14.29□□□□□ -0.12
SRRM4A7MD48 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.29□□□□□ -0.12
SRRM4A7MD48 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SRRM4A7MD48 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.29□□□□□ -0.12
SRRM4A7MD48 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRRM4A7MD48 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SRRM4A7MD48 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.29□□□□□ -0.12
SRRM4A7MD48 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SRRM4A7MD48 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRRM4A7MD48 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.29□□□□□ -0.12
SRRM4A7MD48 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SRRM4A7MD48 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SRRM4A7MD48 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SRRM4A7MD48 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.29□□□□□ -0.12
SRRM4A7MD48 OR6D1P-202ENST00000641007 5290 ntBASIC14.28□□□□□ -0.12
SRRM4A7MD48 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRRM4A7MD48 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.28□□□□□ -0.12
SRRM4A7MD48 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRRM4A7MD48 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRRM4A7MD48 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRRM4A7MD48 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRRM4A7MD48 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SRRM4A7MD48 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SRRM4A7MD48 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRRM4A7MD48 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SRRM4A7MD48 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRRM4A7MD48 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRRM4A7MD48 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRRM4A7MD48 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SRRM4A7MD48 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SRRM4A7MD48 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRRM4A7MD48 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.28□□□□□ -0.12
SRRM4A7MD48 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRRM4A7MD48 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRRM4A7MD48 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.28□□□□□ -0.12
SRRM4A7MD48 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
SRRM4A7MD48 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.28□□□□□ -0.12
SRRM4A7MD48 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.28□□□□□ -0.12
SRRM4A7MD48 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.28□□□□□ -0.12
SRRM4A7MD48 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.28□□□□□ -0.12
SRRM4A7MD48 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SRRM4A7MD48 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.28□□□□□ -0.12
SRRM4A7MD48 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
SRRM4A7MD48 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.28□□□□□ -0.12
SRRM4A7MD48 RN7SL850P-201ENST00000579959 291 ntBASIC14.28□□□□□ -0.12
SRRM4A7MD48 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC14.28□□□□□ -0.12
SRRM4A7MD48 AL390719.2-201ENST00000606993 987 ntBASIC14.28□□□□□ -0.12
SRRM4A7MD48 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SRRM4A7MD48 Z83836.1-201ENST00000624605 1642 ntBASIC14.28□□□□□ -0.12
SRRM4A7MD48 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRRM4A7MD48 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRRM4A7MD48 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
SRRM4A7MD48 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SRRM4A7MD48 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
SRRM4A7MD48 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SRRM4A7MD48 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
SRRM4A7MD48 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SRRM4A7MD48 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SRRM4A7MD48 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SRRM4A7MD48 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms