Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SBNO1A3KN83 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
SBNO1A3KN83 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SBNO1A3KN83 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SBNO1A3KN83 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
SBNO1A3KN83 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SBNO1A3KN83 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
SBNO1A3KN83 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC23.83■■□□□ 1.41
SBNO1A3KN83 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SBNO1A3KN83 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC23.83■■□□□ 1.41
SBNO1A3KN83 AC097637.2-201ENST00000624096 1997 ntBASIC23.83■■□□□ 1.41
SBNO1A3KN83 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SBNO1A3KN83 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SBNO1A3KN83 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
SBNO1A3KN83 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC23.83■■□□□ 1.41
SBNO1A3KN83 AC138761.1-201ENST00000584393 385 ntBASIC23.83■■□□□ 1.41
SBNO1A3KN83 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC23.83■■□□□ 1.41
SBNO1A3KN83 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC23.83■■□□□ 1.41
SBNO1A3KN83 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
SBNO1A3KN83 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC23.83■■□□□ 1.41
SBNO1A3KN83 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC23.83■■□□□ 1.41
SBNO1A3KN83 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
SBNO1A3KN83 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC23.83■■□□□ 1.41
SBNO1A3KN83 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SBNO1A3KN83 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SBNO1A3KN83 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
SBNO1A3KN83 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SBNO1A3KN83 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
SBNO1A3KN83 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC23.82■■□□□ 1.4
SBNO1A3KN83 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC23.82■■□□□ 1.4
SBNO1A3KN83 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SBNO1A3KN83 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SBNO1A3KN83 AC092474.2-201ENST00000424288 719 ntBASIC23.82■■□□□ 1.4
SBNO1A3KN83 PNKD-204ENST00000436005 978 ntTSL 5 BASIC23.82■■□□□ 1.4
SBNO1A3KN83 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC23.82■■□□□ 1.4
SBNO1A3KN83 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC23.82■■□□□ 1.4
SBNO1A3KN83 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC23.82■■□□□ 1.4
SBNO1A3KN83 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SBNO1A3KN83 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SBNO1A3KN83 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC23.82■■□□□ 1.4
SBNO1A3KN83 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC23.82■■□□□ 1.4
SBNO1A3KN83 AL390955.2-201ENST00000603032 514 ntBASIC23.82■■□□□ 1.4
SBNO1A3KN83 LINC00628-201ENST00000628516 1289 ntBASIC23.82■■□□□ 1.4
SBNO1A3KN83 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SBNO1A3KN83 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC23.82■■□□□ 1.4
SBNO1A3KN83 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC23.82■■□□□ 1.4
SBNO1A3KN83 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SBNO1A3KN83 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC23.81■■□□□ 1.4
SBNO1A3KN83 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SBNO1A3KN83 PC-208ENST00000529047 1607 ntTSL 3 BASIC23.81■■□□□ 1.4
SBNO1A3KN83 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC23.81■■□□□ 1.4
SBNO1A3KN83 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SBNO1A3KN83 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC23.81■■□□□ 1.4
SBNO1A3KN83 MIR4745-201ENST00000577608 62 ntBASIC23.81■■□□□ 1.4
SBNO1A3KN83 AC009093.7-201ENST00000623853 1223 ntBASIC23.81■■□□□ 1.4
SBNO1A3KN83 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SBNO1A3KN83 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SBNO1A3KN83 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
SBNO1A3KN83 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SBNO1A3KN83 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SBNO1A3KN83 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SBNO1A3KN83 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SBNO1A3KN83 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SBNO1A3KN83 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SBNO1A3KN83 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC23.81■■□□□ 1.4
SBNO1A3KN83 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SBNO1A3KN83 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SBNO1A3KN83 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SBNO1A3KN83 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SBNO1A3KN83 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC23.81■■□□□ 1.4
SBNO1A3KN83 AL096828.2-201ENST00000567259 1965 ntBASIC23.81■■□□□ 1.4
SBNO1A3KN83 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SBNO1A3KN83 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SBNO1A3KN83 KLK8-202ENST00000320838 456 ntTSL 5 BASIC23.8■■□□□ 1.4
SBNO1A3KN83 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
SBNO1A3KN83 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
SBNO1A3KN83 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC23.8■■□□□ 1.4
SBNO1A3KN83 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC23.8■■□□□ 1.4
SBNO1A3KN83 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SBNO1A3KN83 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC23.8■■□□□ 1.4
SBNO1A3KN83 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SBNO1A3KN83 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC23.8■■□□□ 1.4
SBNO1A3KN83 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC23.8■■□□□ 1.4
SBNO1A3KN83 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
SBNO1A3KN83 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
SBNO1A3KN83 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
SBNO1A3KN83 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC23.8■■□□□ 1.4
SBNO1A3KN83 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SBNO1A3KN83 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SBNO1A3KN83 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SBNO1A3KN83 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SBNO1A3KN83 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
SBNO1A3KN83 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC23.79■■□□□ 1.4
SBNO1A3KN83 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC23.79■■□□□ 1.4
SBNO1A3KN83 AC093520.2-201ENST00000561830 333 ntBASIC23.79■■□□□ 1.4
SBNO1A3KN83 IGHV3OR16-6-201ENST00000568775 360 ntBASIC23.79■■□□□ 1.4
SBNO1A3KN83 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SBNO1A3KN83 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC23.79■■□□□ 1.4
SBNO1A3KN83 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
SBNO1A3KN83 AJ011932.1-201ENST00000621707 465 ntBASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms