Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
CCDC66A2RUB6 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC66A2RUB6 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CCDC66A2RUB6 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CCDC66A2RUB6 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC66A2RUB6 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CCDC66A2RUB6 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CCDC66A2RUB6 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CCDC66A2RUB6 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC66A2RUB6 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC66A2RUB6 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC66A2RUB6 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC66A2RUB6 AC036111.1-201ENST00000533973 1582 ntBASIC19.25■□□□□ 0.67
CCDC66A2RUB6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC66A2RUB6 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC66A2RUB6 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC66A2RUB6 RPS2P55-201ENST00000397318 883 ntBASIC19.25■□□□□ 0.67
CCDC66A2RUB6 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CCDC66A2RUB6 AC107956.1-201ENST00000494359 873 ntBASIC19.25■□□□□ 0.67
CCDC66A2RUB6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC66A2RUB6 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.25■□□□□ 0.67
CCDC66A2RUB6 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.25■□□□□ 0.67
CCDC66A2RUB6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.25■□□□□ 0.67
CCDC66A2RUB6 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CCDC66A2RUB6 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC66A2RUB6 TSPY26P-202ENST00000565928 3884 ntBASIC19.25■□□□□ 0.67
CCDC66A2RUB6 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC66A2RUB6 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CCDC66A2RUB6 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC66A2RUB6 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC66A2RUB6 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC66A2RUB6 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC66A2RUB6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC66A2RUB6 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.25■□□□□ 0.67
CCDC66A2RUB6 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC66A2RUB6 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC66A2RUB6 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC66A2RUB6 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CCDC66A2RUB6 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CCDC66A2RUB6 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC66A2RUB6 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC66A2RUB6 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC66A2RUB6 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC66A2RUB6 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC66A2RUB6 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CCDC66A2RUB6 AC009102.3-201ENST00000623118 1491 ntBASIC19.24■□□□□ 0.67
CCDC66A2RUB6 SDHAP2-201ENST00000455183 2001 ntBASIC19.24■□□□□ 0.67
CCDC66A2RUB6 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC66A2RUB6 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.24■□□□□ 0.67
CCDC66A2RUB6 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC66A2RUB6 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CCDC66A2RUB6 AC012618.2-201ENST00000428058 849 ntBASIC19.24■□□□□ 0.67
CCDC66A2RUB6 UBE2SP1-201ENST00000450587 669 ntBASIC19.24■□□□□ 0.67
CCDC66A2RUB6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC66A2RUB6 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.24■□□□□ 0.67
CCDC66A2RUB6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC66A2RUB6 REXO1L10P-201ENST00000615707 1290 ntBASIC19.24■□□□□ 0.67
CCDC66A2RUB6 REXO1L12P-201ENST00000622156 912 ntBASIC19.24■□□□□ 0.67
CCDC66A2RUB6 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC66A2RUB6 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC66A2RUB6 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC66A2RUB6 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC66A2RUB6 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC66A2RUB6 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC66A2RUB6 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CCDC66A2RUB6 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CCDC66A2RUB6 HOXB1-202ENST00000577092 1414 ntBASIC19.24■□□□□ 0.67
CCDC66A2RUB6 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC66A2RUB6 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC66A2RUB6 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC66A2RUB6 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC66A2RUB6 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC66A2RUB6 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC66A2RUB6 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC66A2RUB6 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC66A2RUB6 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC66A2RUB6 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC66A2RUB6 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.23■□□□□ 0.67
CCDC66A2RUB6 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC66A2RUB6 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC66A2RUB6 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC66A2RUB6 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC66A2RUB6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC66A2RUB6 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
CCDC66A2RUB6 MIR149-201ENST00000384879 89 ntBASIC19.23■□□□□ 0.67
CCDC66A2RUB6 CRYGFP-201ENST00000418459 633 ntBASIC19.23■□□□□ 0.67
CCDC66A2RUB6 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC66A2RUB6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC66A2RUB6 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC66A2RUB6 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC66A2RUB6 MIR4674-201ENST00000582457 87 ntBASIC19.23■□□□□ 0.67
CCDC66A2RUB6 AC233702.5-201ENST00000584107 538 ntBASIC19.23■□□□□ 0.67
CCDC66A2RUB6 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
CCDC66A2RUB6 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC66A2RUB6 AC113410.3-201ENST00000623366 203 ntBASIC19.23■□□□□ 0.67
CCDC66A2RUB6 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC66A2RUB6 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC66A2RUB6 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CCDC66A2RUB6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC66A2RUB6 KRT8P7-201ENST00000533003 1432 ntBASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms