Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV3S1A0A5B6 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV3S1A0A5B6 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.61■□□□□ 0.25
TCRBV3S1A0A5B6 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV3S1A0A5B6 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV3S1A0A5B6 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV3S1A0A5B6 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV3S1A0A5B6 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.61■□□□□ 0.25
TCRBV3S1A0A5B6 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV3S1A0A5B6 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.61■□□□□ 0.25
TCRBV3S1A0A5B6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.61■□□□□ 0.25
TCRBV3S1A0A5B6 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.61■□□□□ 0.25
TCRBV3S1A0A5B6 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV3S1A0A5B6 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV3S1A0A5B6 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV3S1A0A5B6 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV3S1A0A5B6 RNF216P1-203ENST00000404404 2427 ntBASIC16.61■□□□□ 0.25
TCRBV3S1A0A5B6 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV3S1A0A5B6 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV3S1A0A5B6 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV3S1A0A5B6 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.61■□□□□ 0.25
TCRBV3S1A0A5B6 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.61■□□□□ 0.25
TCRBV3S1A0A5B6 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV3S1A0A5B6 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV3S1A0A5B6 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TCRBV3S1A0A5B6 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV3S1A0A5B6 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 AC005104.2-201ENST00000427818 678 ntBASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 AC008687.5-201ENST00000593746 558 ntBASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 AC010240.3-201ENST00000607688 395 ntBASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 KRT8P47-201ENST00000604727 1398 ntBASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 CYP2T1P-202ENST00000641596 2535 ntBASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV3S1A0A5B6 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV3S1A0A5B6 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV3S1A0A5B6 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.59■□□□□ 0.25
TCRBV3S1A0A5B6 AC008741.2-201ENST00000612792 3115 ntBASIC16.59■□□□□ 0.25
TCRBV3S1A0A5B6 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV3S1A0A5B6 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.59■□□□□ 0.25
TCRBV3S1A0A5B6 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV3S1A0A5B6 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
TCRBV3S1A0A5B6 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV3S1A0A5B6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV3S1A0A5B6 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.59■□□□□ 0.25
TCRBV3S1A0A5B6 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV3S1A0A5B6 AC092068.3-201ENST00000587894 2016 ntBASIC16.59■□□□□ 0.25
TCRBV3S1A0A5B6 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TCRBV3S1A0A5B6 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV3S1A0A5B6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV3S1A0A5B6 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.59■□□□□ 0.25
TCRBV3S1A0A5B6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV3S1A0A5B6 SLC25A1P3-201ENST00000395415 828 ntBASIC16.59■□□□□ 0.25
TCRBV3S1A0A5B6 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TCRBV3S1A0A5B6 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV3S1A0A5B6 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV3S1A0A5B6 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV3S1A0A5B6 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.59■□□□□ 0.25
TCRBV3S1A0A5B6 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
TCRBV3S1A0A5B6 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV3S1A0A5B6 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.59■□□□□ 0.25
TCRBV3S1A0A5B6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TCRBV3S1A0A5B6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TCRBV3S1A0A5B6 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.59■□□□□ 0.25
TCRBV3S1A0A5B6 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms