Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 LINC00167-201ENST00000530583 1419 ntBASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 HES2-202ENST00000377836 507 ntTSL 2 BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 AP003733.1-201ENST00000491725 852 ntBASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 RN7SL850P-201ENST00000579959 291 ntBASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 AC116407.2-201ENST00000613639 860 ntBASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV1A0A0A0MS02 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 TSPY12P-201ENST00000421279 868 ntBASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 TMPOP1-202ENST00000424642 1267 ntBASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 HLA-F-220ENST00000434407 884 ntBASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 KRT18P38-201ENST00000449496 1282 ntBASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 PPOX-214ENST00000535223 664 ntTSL 3 BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 ARL16-209ENST00000573715 763 ntTSL 3 BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 ARL16-211ENST00000576135 694 ntTSL 3 BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 TEN1-204ENST00000588202 862 ntTSL 3 BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 LITAF-220ENST00000620789 692 ntTSL 5 BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms